Vitis riparia (riverbank grape): 117930712
Help
Entry
117930712 CDS
T07274
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117930712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117930712
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
SR proteins
117930712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117930712
NCBI-ProteinID:
XP_034707257
LinkDB
All DBs
Position
14:28026955..28044006
Genome browser
AA seq
288 aa
AA seq
DB search
MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED
AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS
ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY
IRVREYEPRSFSRSPSRSPSVSRSRSPRRSRSYSYSNHSSGRSRSRSVSSQARSRSVSRS
RSPLISPRRHKRVSRSPRKYRSPSRSLSGSRSPSRSSYRSRSADSRSD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgttctagccgcactgtctatgttggcaatcttcctggtgatattcgtgag
agagaagtagaagatctgttttacaagtatgggcctattgttgacattgatttgaagatc
cctccaagaccaccaggctatgcttttgttgagttcgaagatgctcgtgatgctgaagat
gctatttatggtcgggatgggtataattttgatggacatcgactgcgagtcgaacttgct
catggtgggagaggacaatcatcatcagtggaccactatagcagttacagtagcagtagc
cgtggtggactttcacggcactctgaatatcgagtattggttactggattaccttattct
gcttcctggcaagatctaaaggaccatatgcgtcgagctggggatgtttgtttctcccaa
gtgttccgtggtcgcggtgggatgactggaattgtggattatacaaactatgatgacatg
aaatatgctataaggaagcttgatgactctctgtttaagaatcaattttctcgggcttat
atacgggtgagggagtatgaacctagaagcttctctcgaagtcccagtcgtagcccatct
gtgtcaagaagcagaagcccccgtcgcagtcgtagctatagttattcaaatcattcatca
ggcagatctcgttcgaggtctgtttcttcacaggcacgctcgagatcagtttcaaggtcc
agatctcccttaatatctcctcgtcgtcacaagcgggtgagcagaagcccaaggaaatac
aggagcccaagcaggagcttatctggatctcgttcaccctcgcggagttcttacaggagc
agatcagctgactcgaggagcgattga
DBGET
integrated database retrieval system
