Vitis riparia (riverbank grape): 117930730
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Entry
117930730 CDS
T07274
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117930730
Enzymes [BR:
vri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117930730
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117930730
Prokaryotic type
117930730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
117930730
NCBI-ProteinID:
XP_034707284
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All DBs
Position
14:complement(21446915..21470044)
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AA seq
694 aa
AA seq
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MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE
TKISDQSNKGYASEIELFRSLVGDSDAECLKGLIDQVASGIEDGVSPIVLSPSSDKSHRT
AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS
DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK
QYANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL
GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKE
SDDIEGTLRQFPRHLVAEKAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
SMRVQKYGTKQVVLGDLVYCKGDNAEKETRVVNSEFDDDGCSDAFDSSHFDEISETDLPE
ERKDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESVH
SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPLNIIGGEDL
RNGNEKENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKL
SFTLPASCYATMAIRELLKTSTSVAFQKTLNTLS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacctagaagaatcagacgttggcatctccttctatatctcccagcttcctggt
ttccgtggcattctcaagcaaaggtactgtgattttattgttaatgaagtagattctgat
gggaatgttgttcacttaacgtccctagatgctcctcctgagagtatggagaaaaatgag
acaaagatatccgatcaatcaaataaaggttatgcttctgaaattgaactgtttaggtct
cttgtgggagactccgatgctgagtgcctaaagggtctcattgatcaagtagcttctggc
attgaagatggtgtctccccaattgttctttctcccagttctgataaatcccatagaacg
gcagtgcataattttttcaaggagaatttgaaattccttgttaccgatacaatagatgga
ccagacacctcatcaaaatgcattcgtgtgaggttaaattcgggggggtctcacaacaat
ggtagaaactccaggaaacggaaagatagacgtgataagccctttgatagtagaggttca
gacaattggtcagagcatgttggcaaattccttaggtttcatctttacaaggagaacaag
gatacccaggaggccataggattgattggaaagatgctgggcatccagccaagatcattt
ggatttgcaggcacaaaagacaaacgctctgtatctacacaaagggtaactgttttcaag
cagtatgcaaatagactagctgctctaaatgaaaggttgattggtatcaaagttggtgac
ttttgccatgtcagggaagggcttgttcttggacagctcctaggtaatcgattcacaatt
acactgcgtggagttgttgcagattctgaagagaccataaaagcatctgctgatgcattg
ggaaggcttggatttattaactactttggtttgcaacgttttggaagtggttctgtgcca
actcaccttattggagctgcattactcagaggagagtgggaaactgctgtgagcttgatt
ctggatccaagagaaggggaaagggatgcgataaggaaggcacgggaatattataaggaa
agtgatgatattgaagggaccctaaggcaattccctcgtcatctggttgctgaaaaagct
atactgcagtgtttgaagaaatatcctgggaattacttgcaggccctgaaggctatacct
aggactttgagaatgatgtatgtacatagttaccaaagctatctgtggaaccatgcagct
agtatgagagtgcaaaaatatggaactaaacaagttgtattgggagacttggtgtattgt
aaaggagataatgctgaaaaagagacaagagttgttaattctgaatttgatgatgatggc
tgtagtgatgcgtttgattctagccatttcgatgaaatctctgaaacagaccttcctgaa
gaaaggaaagatccagtgaaggctctggatgcagaagatttacttactgggaattataca
attgatgatgttgtccttcctttgcctggttcaagagcaatttatccgacaaatgatatt
gcccaagtttatcatgatttcgcaaaaaaggatgctatcagcttgacagagagtgtacat
agtgtcaaggaattctcaataaccaacatgactggaggttttaggagggttttccaaaag
ccaatcgactttgaatgggaactactcacatatactgagggaaacataccattggcagaa
acagattgggacaaaatcaccaaatcaaaaccattgaacataattggaggagaggatttg
aggaatggaaatgaaaaagaaaattcttttcaatgcatgaagcaatctgaaagctttgaa
cataatgtgaatctttcaacggataacaatgagccaaatggtgtgactgaaataggcctg
ccacaagttgaacctcagttcgagtctggtgctccagaagcccagagggctctaaaatta
agctttacactcccagcttcctgctatgcaacaatggcaattagggagcttctgaaaaca
tcaacctcggttgcatttcagaaaaccttaaacacattgagctaa
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