Vitis riparia (riverbank grape): 117930743
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Entry
117930743 CDS
T07274
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117930743
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117930743
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
117930743
NCBI-ProteinID:
XP_034707315
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Position
14:10265594..10282373
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AA seq
828 aa
AA seq
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MSPALFLSLSPIPNHSQFPSNSNSLSNSSIRILNLQRIHSFKPPPISTTTTATTNHPDHS
ISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKV
SGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRIGGKMPWLK
TEKVVFRRTKKEKVMTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVW
KSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMR
PGLVASADASNSKLNQSNFEDDLTISEIKFHESTTGEKLGRKDGEEDSSPTGIFMEEMVD
SQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRS
KLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNE
QMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREVEFKGCQIREEDARLKA
IETSFVTDEPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQER
KLFILKMKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRG
VFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIII
YRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLSDLQKG
SRRIDQRESEKFTKHEPPDVPYHESYFQGVKRCGYAIRGESSAHHPPS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgctctctttctctctctttcccctataccgaaccattcccaatttccctcc
aattccaactcactctcaaattcctccattcgcatcttaaaccttcaacggattcattcc
ttcaagcctccgcccatttccaccaccaccaccgccaccacgaaccacccagatcattca
atctcatcacagcccgtttcgggtaccgatgccgccattaaaatgcccacagctccttgg
atgaaaggtcctcttcttctccagcccaatgaagtcctggacctctccaaagcaagaccc
aagaaagtagccggcagtgccggagctgaaaagcctgaccggtctctgaccgagaaagtg
agcggcggaagaggggcgaaggcaatgaaaaagatcatgcaaagcattgtgaaacttcaa
gaaactcacacttcagacgagacacaagaaaatacagaagaatttgaatttggggtttca
cttgaagggattgggggagatgagaattcgagaatcggcgggaaaatgccgtggttgaag
acggagaaggttgtgtttcgtcggacgaagaaggagaaagtgatgactgccgcggaattg
actcttgatccaatgttgctggaaagattgagaggcgaggctgtgaaaatgagaaaatgg
gtgaaggtcaagaaagctggggtgactgagagtgttgtcgatcaaattcacatggtttgg
aagagcgatgaacttgccatggtcaaattcgacatgcctttgtgccggaatatggataga
gcgcgggagattcttgagatcaagaccagaggcttggttatttggagtaagaaagacact
cttgttgtttataggggatccaattatcagtcaacttcaaaacattttcaaaagatgcgt
ccaggacttgtagctagtgcagatgcttctaactcaaaactcaatcaatcaaattttgaa
gacgaccttacaatttctgaaataaaatttcatgaaagtaccactggtgaaaagttgggc
aggaaggatggagaagaggactcttcacccactggcatatttatggaggaaatggtggat
tctcaacctgtaaatgggtcattgtatgagagggaagcggatagattactagatggctta
ggacctcgatttattgactggtggaggccaaaacctcttccagttgatgcagacttgctt
ccagaagtgcttcctggatttaggcctccattcaggctttccccacctcagactagatca
aagctgactgatgatgaattgacatacttgcggaagcttgcttacgctctaccaactcat
tttgtccttgggagaaacagaaagcttcaaggattagctgctgctatattgaaattgtgg
gagaaaagtctgatagtaaagattgcaataaagtggggaattccaaacactaagaatgag
caaatggcaaatgagctcaagtgtctcactggaggagttctgttactgcgtaataagttc
tttatcatactttatagaggcaaagattttcttccttgtagagttgcaaatttaatagtt
gagagagaagtggagttcaaaggatgccaaattcgtgaagaagatgccaggctgaaagca
attgaaacttcctttgtgactgatgaaccgctggcaaacactagcactactggaacatta
tcagaattccagaatatagaaacagaattcaggggcctgaaagatggaaatacggagatt
gaagttgaattggaagctgaaaaagaaagattagagaaggaactgaaaaagcaggagcgc
aagcttttcattcttaaaatgaagatagagaggtcagccaaagtgttagcaaagttgaat
tctgcttggagacctgctgatcatgatgcagacaaagaaatgataacagaagaggagaga
gaatgtttcagaaagataggacagaaaatggatagcagtctccttcttggaagaagaggg
gtctttgatggtgtaattgaaggcctccatcaacactggaagcatagagaaatagtcaag
gtgatcacaatgcagagatcattttcacaggtcctttatactgcaaagttgcttgaatca
gaaagtggaggagttctagtttcaatagacaagctaaaagaaggccatgctataatcatc
tatcgtgggaaaaactacagacgccctataaagttggtgcccaagaatcttctgactaaa
cgagaagcattaaataggtcccttgaaatgcagagaattggatcacttaaattttttgca
tatcagagacagcaggcaatctcagatttgaagcttaaactgtcagatctacagaaagga
agcagaagaattgatcaaagagaatctgaaaagttcacaaagcatgagccacctgatgtg
ccatatcatgaatcctattttcaaggggtaaaaaggtgtgggtatgccatcagaggggag
tcctcagctcaccatcctccaagttag
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