Vitis riparia (riverbank grape): 117930844
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Entry
117930844 CDS
T07274
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117930844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117930844
03036 Chromosome and associated proteins [BR:
vri03036
]
117930844
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117930844
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117930844
PBAF complex
117930844
GBAF(ncBAF) complex
117930844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
117930844
NCBI-ProteinID:
XP_034707489
LinkDB
All DBs
Position
14:4582900..4586033
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AA seq
548 aa
AA seq
DB search
MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQA
HVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNS
NMKRALQKPPVRPPGLLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALY
TQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPT
WTLKIIGRILEEGVDPDQAAMLHKANVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENAR
SPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHY
VKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGN
CPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFL
GFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVA
GSDAPGST
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaataacaataatccacccaagaaccttggggcttcttcgtcgccctttggg
aatgccggaatgggttctcctgctatgcctgcaaaccctgtgttctcgcaaccgcaagct
caggggcaaattgggggtggctttcagggtcagtttcagctgtcccaggctcatcaagcc
catgtcattgcccaggcacattctaaagcacaagctcatgcccaagctcaagcgcaggct
gcccacgcccagttccaagctcagttacaggctcaaggaatgacccttaatcagtcccaa
ggcattgggattgggaatatgggtggatcttcgccctccataggagcacccggcaattca
aacatgaaacgggctttgcagaagcctccagtacgccctcctggccttttaggtgctaat
actatctctcctttgaaagtcatggaacttacacctgctgcccgcagaaagaagcagaag
cttccagagaagcaattacaagatagagtggcagcaattctgccagagtctgctttgtac
acacaactccttgagtttgagagtcgagttgatgctgctctagctaggaagaaaattgac
attcaagaggcacttaaaaaccctccttgtgttcaaaaaactcttagaatttatattttc
aacacttttgctaatcagattcgcacaattcccaagaagccaaatgcagagccacctacc
tggaccctcaagataattgggaggatcttggaagaaggggtagatcctgaccaggctgca
atgctccacaaagcaaatgtctcatacccaaaattctcgtctttcttcaagagagtcacc
atttccctagaccagagactatatcctgataaccctattattatatgggagaatgctcga
tccccagcacctcatgagggctttgaggtaaagagaaagggggataaagaatttactgtg
aatatacggttagaaatgaattatgtgcctgagaagtttaagctttcttcagctttgatg
gaagttcttggtattgaggttgatacacgcccaagaattatagctgcaatctggcattat
gtgaaggctagaaaattgcagaaccccaatgacccttcatttttcaattgtgatccgcct
cttcagaaagtgtttggggaagacaagatgaaattcaccatggtatcacagaagatatca
cagcatttgtctcctccgcaacctatacatttggaacataagatcaagctttcggggaat
tgtccagctggaaacgcgtgctatgatgtgttggtcgatgtcccctttccaatacagaag
gaattgtctgctttattggctaacacggagaaaaacaaagagatcgatgcatgtgatgaa
gcaatttgttctgctataagaaagatacatgaacaccgtcggaggcgggcattctttctt
gggtttagtcaatctcctgtggaatttattaacactttgattgaatctcaaagcaaagat
ctgaagctagtggctggggaagctagtcgcaatgctgaaaaggagcggcgatcggacttc
ttcaaccagccatgggttgaagatgctgtcattcgttatctgaatcgcaagccagttgct
ggaagtgacgctcctgggagtacatga
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integrated database retrieval system
