Vitis riparia (riverbank grape): 117930868
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Entry
117930868 CDS
T07274
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117930868
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117930868
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117930868
Protein phosphatases and associated proteins [BR:
vri01009
]
HAD phosphatases
Fcp/Scp phosphatases
117930868
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117930868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
117930868
NCBI-ProteinID:
XP_034707519
LinkDB
All DBs
Position
14:complement(29331339..29336713)
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AA seq
658 aa
AA seq
DB search
MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC
SNSLPSERLRKGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSER
INGILRLFGESSLESNKILGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGYVP
QRDRNLKPKNIKNRKEGSKSSNSKMDSGKKFVIDEMDFVSTIITEDEYSISKSSKGLKDT
TSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRSRVIFKDEFSTAEVPSV
PSQSGSELNGVKGKEEYHTENAAQLGPTKPKSSLKPSGGKKVTRSVTWADEKMDGADSRD
FCKVRELEIKKEDPNGLGDIDVGDDDNALRFTSAEACAIALSQAAEAVASGETDMTDAVS
EAGIIILPHPRDMDEGESLKDADLLEPEPVPLKWPIKPGISHSDIFDSDDSWYDTPPEGF
SLTLSPFATMWMALFAWITSSSIAYIYGRDESFHEEYLSVNGREYPKKIILTDGRSSEIK
QTLAGCLARALPGLVADLRLPIPVSNLEQGVGRLLDTMSFVDALPSFRMKQWQVIVLLFI
DALSVCRIPALTPHMTSRRMLFPKVFDAAQVSAEEYEVMKDLIIPLGRVPQFSAQSGG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggatcagcctattgctgtgaaagatgcagtacacaagctgcaactgttcctt
cttgaaggaattcaaaatgaaaaccaactatttgcagctgggtctttgatgtcccggagt
gactatgaagatgttgtgactgagcgtacgattgcaaatttgtgtggttatcctctctgc
agcaattctctgccatcagagaggctgcggaaaggccattaccgcatttcgctgaaggag
cacaaggtttatgacctccatgagacgtacatgtactgctcatctggttgtgtggttaac
agcagatcatttgcagggagtttgcaggaagagaggtgctcagttttaaactcagagaga
attaatggaattctgaggttgtttggggaatcaagcttggaatccaataagattttggga
aaacatggggatttagggttgtcggaattgaagatacgtgagaatgttgaaaagaaagct
ggggaagtgtctatggaagactggattggtccatcaaatgcaattgaaggttatgttcca
cagagggatcgcaatttgaagcccaaaaatattaaaaatcgtaaagaagggtctaaatct
agcaactccaagatggacagtggaaaaaaatttgtgattgatgagatggactttgtcagt
accataatcaccgaggatgagtacagcatttcaaaaagctctaaaggtttgaaagacact
acttcccatgcaaaatcaaaagaaccaaaagaaaaggcaagcataggggatcagctttcc
atgttagaaaagtcagctcctcctatacagaatgattctgaaagtaaattaagagaatca
aaagggaggagtagggttattttcaaagatgagttcagcactgcggaagttccttcagtt
cccagccaaagtggttctgagttaaatggtgtgaaagggaaggaggaatatcatactgaa
aatgcagcacaattgggtcccaccaagccaaaatcctctctgaaaccttcaggtggaaaa
aaagtaactcgctctgttacttgggctgatgagaaaatggatggtgcagacagtagagat
ttttgtaaagtgagggaattggagatcaagaaagaagatcctaatgggttaggggatata
gatgtgggagatgatgataatgctttaagatttacatcagcagaagcatgtgcaatagca
ttgagccaggcagcagaagctgttgcatctggagaaactgatatgactgatgctgtgtct
gaagctggaattatcatattgccacatccacgtgatatggatgaaggggaatctctaaag
gatgctgatttgcttgaacctgaaccagttcctttgaagtggccaataaaacctggaatt
tcacattcagatatatttgattctgatgattcttggtatgatacgccaccagaagggttc
agtttgactttgtcaccatttgcaacaatgtggatggcactctttgcatggataacatca
tcttctattgcttatatatatggacgggatgaaagtttccatgaggagtatttatcagtt
aacggaagggagtatcccaaaaaaattattttgactgatggccgttcttctgaaattaag
caaactctagcgggttgtctggctcgggctttgcctggacttgttgcagatctcagattg
ccaataccagtgtcaaatctggagcagggagtggggcgcttgttggatacgatgtctttt
gttgatgcacttccatcattcagaatgaaacagtggcaagtgattgttcttttgtttatc
gatgccctctctgtttgtcggattcctgcacttactccacacatgacaagtaggaggatg
ttgtttccaaaggtgttcgatgctgctcaagtaagcgcagaagaatatgaagttatgaag
gatctcatcatccctcttggccgagtacctcagttctctgcacaaagtgggggttaa
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