Vitis riparia (riverbank grape): 117930882
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Entry
117930882 CDS
T07274
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117930882
Membrane trafficking [BR:
vri04131
]
Autophagy
Other autophagy associated proteins
Others
117930882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
WD40_CDC20-Fz
WDR55
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
117930882
NCBI-ProteinID:
XP_034707541
LinkDB
All DBs
Position
14:27877196..27882851
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AA seq
425 aa
AA seq
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MATLSPPSSSASWPLPPSDPNPNPNFLSLPVAPNSPPSASSSQTIDLPESEYNDDSVPPS
ADPTRLPAPTLLHLSFNQDHGCFSAGTDHGFRIYNCDPFREIFRRDFCGDDGGGGTGIGV
VEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQTRCIGELSFRSEVKSVRLRRDRIVAIL
LQKIFVYNFADLKLLHQIETIANPKGLCEVSQLSGSMVLVCPGLLKGQVRVEHYNSKRTK
FIMAHDSRIACFALTQDGRLLATSSSKGTLVRIFNTLDGTLLQEVRRGADRAEIYSVAFS
SSAQWLAVSSDKGTVHVFSLKVESGSLGSDRSRSSSEPNLSVPSAVSSLSFMKGVLPRYF
SSEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLK
PEETF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccacgttgtcgcctccttcttcgtcggcatcttggcctctgcctccctcagaccct
aaccccaaccctaatttcctctcactgcccgtggcaccgaattcgcctccctccgcttcc
tcttcccaaaccatagacctcccagaatctgaatacaacgacgattcggttcctccaagc
gctgacccaacccgtttgcccgctccgacgctgctccacctctcctttaaccaagaccat
ggctgcttctccgccggcaccgaccacggattccggatctacaactgcgatcccttccgc
gagatcttccgccgcgacttctgcggcgatgacggcggcggcggaacggggatcggagtg
gtggagatgctgttccggtgcaatattctggcacttgtcgggggcggtcccgacccgcag
tacccgccgaacaaggttatgatctgggacgaccaccagacgaggtgcatcggtgagctt
tccttccggtcggaggtgaaatcggtgcggctccgacgggaccggatagtggcgattctg
ctgcagaagatcttcgtatacaattttgctgacctgaagctgctacaccaaatcgagacg
attgccaatcccaagggactgtgtgaagtttcgcagctatcgggatcgatggttctagtg
tgtccggggttgcttaaggggcaagttagggttgagcactataattcgaagaggactaag
ttcataatggcgcacgattcccggattgcgtgttttgccctcacgcaggatgggcggttg
ctggcgacatcgagtagtaaggggactttggttaggattttcaatactttggatggtaca
ttgttgcaggaggtaaggagaggtgcagatagagcagaaatttacagcgtagctttctct
tctagtgcccaatggctggctgtttctagtgacaagggaactgtgcatgtcttcagccta
aaagttgaatcaggatcattagggagtgacagatcacgcagttcatctgaaccaaatctt
tctgttccatcagctgtttcatctctctccttcatgaaaggtgtgctgccaaggtatttc
agctcagaatggtctgttgctcagttccgattgcatgaaggttctcagtacattgttgcc
tttggccaccaaaagaacacggttgtgatccttggcatggatggaagtttctaccgatgc
cagtttgatccagtagcaggtggagagatgacccagctggagtactacaatttcctgaag
cctgaagaaactttctaa
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