Vitis riparia (riverbank grape): 117930939
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Entry
117930939 CDS
T07274
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117930939
03036 Chromosome and associated proteins [BR:
vri03036
]
117930939
Transcription factors [BR:
vri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117930939
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117930939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117930939
NCBI-ProteinID:
XP_034707637
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All DBs
Position
14:1466246..1473934
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AA seq
644 aa
AA seq
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MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN
QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGINPEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEASLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS
EELLNTKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPSASKASSSKKKPKDG
DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKM
TAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDSE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggtcatctcttcaacaatatctctctcggcggtcgcggcggaacgaatcca
gggcagttgagggttcatccaggagggatattatggaaaaagcaaggaggtggaaaggct
gttgaggttgacaaatctgatattgttggggtgacctggatgaaagtcccaagaactaat
cagcttggtgttcgagttaaagatgggttatattacaaattcactggtttccgtgagcag
gatgtcactaatttgaccaattttttccaacattcttgtggaataaacccagaagagaag
cagctttctgtgagtggccgcaactggggagaagttgatttaaatggcaatatgctgact
tttctggttggttcgaagcaagcatttgaagcatctttagcagatgtttcacagacacag
atgcaagggaaaaatgatgtcattttggagttccatgtggatgatacaactggggctaat
gagaaagattcattgatggagataagctttcacataccaaattccaatacccaatttgtt
ggtgatgaaaatcgtcccccagctcaagtattccgtgataaaatcatgtcaatggcggat
gttggtgctggaggtgaagaagcagtcgttacatttgaggggattgcaattcttacacca
aggggacggtacagtgtggaactgcatttgtcattcctacgcctgcagggacaggctaac
gattttaaaattcaatacagcagcgtcgttcgccttttcttactacctaagtctaaccag
ccacatacctttgttgttgtgacactggatccaccaatccgtaaagggcagactttgtat
ccacatattgtgatgcagtttgaaacagactatgtggttcaaagtgaattgtcattaagt
gaagaacttttgaataccaagtacaaggacaagttggagccttcatataagggactcatt
catgaagtcttcaccttgatattgcgtggcttgtctggtgccaaggtcacaaaaccaggg
aaattccggagctgtcaggatggttatgcagtgaagtcatcattgaaagctgaagatggt
gttttgtatccactagaaaagagcttcttctttttacccaagcctcctacccttattctt
catgaggagattgactatgtcgagtttgagaggcatgctgctggaggctcaaatatgcat
tactttgatcttcttataagactaaagactgagcaagaacatctcttccggaatattcag
aggaatgaataccataatctttttgactttatcagtgggaaaggcttgaaaattatgaat
cttggagatgtccaaaccgcagatggtgttgctgctgttcttcagaatgatgatgatgat
gctgttgacccacatcttgagcggattaagaatgaagctggtggagatgagagtgatgaa
gaggatgaagattttgttcttgacaaggacgacggaggctctcctactgatgattctggg
gaagaggaatctgatgctagtgaaagtggaggcgagaaagaaaagccttccaaaaaggaa
tccaagaaagagccttctgcttctaaggcatcttcgtctaagaagaaacccaaagatgga
gatgaagatggttcaaagaagagaaaacagaagaagaaaaaggatccaaatgcgccaaag
agggctatgtctggtttcatgttcttttcacaaactgaaagggagaatataaagaaaagt
actcctggaattgccttcactgaggtggggagagttcttggtgataagtggaaaaagatg
acagcggaggagaaagaaccctacgaggcaaaagctcaagcagataagaaacgatacagg
gatgaaattagcggctacaagagcaacccacaacccatgaacgtagactccgggaatgaa
tccgacagtgaatag
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