KEGG   Vitis riparia (riverbank grape): 117930958
Entry
117930958         CDS       T07274                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117930958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117930958
Spliceosome [BR:vri03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117930958
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    117930958
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 117930958
NCBI-ProteinID: XP_034707666
LinkDB
Position
14:28458011..28462386
AA seq 393 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEYKYVRILGAFYLRLTGIDTDVYQYL
EPLYNDYRKLRRRLSDGNYSLTHVDEVIDELLTKDYSCDVALPRIKKRWTLESLGTLEPR
RSALEDDFEEEEEKEEDDQLMDELDAGAHEKDYYRGRSPARERDRDRKRDSHRYRDRDYD
RERGRGRERDRERERDRDSYRDRERERDRDRDRYRLRDDKEYGRDREREREREGRERERR
DRDRGRRRSHSRSRSRSKDRKDREGGDHRKRHARSSTSPRRRGDMPEDGTTREEPRKKKE
KKEKKDDGTDHPDPEIAEANRLRASLGLKPLKL
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacggacccagcggcgaagagcatacgaggcacgaatccgcaaaacttg
gtggagaagattctgaggtcgaagatttaccagaacacgtactggaaggagcagtgcttt
ggattgaccgcggagactctggttgacaaggccatggagctcgaccaccttggcggcacc
tttggtggtaaccgcaagcccacgcccttcatgtgcctcgtcatgaaaatgctccagatc
cagcccgagaaggacatcgttgtcgagttcataaaaaacgaagagtacaaatatgtccgt
atacttggtgcattttatttgcgtcttacagggatagatactgatgtgtaccaataccta
gagcctctatacaatgactatcggaaattgaggagaagattatctgatggaaattattct
ttgacacacgttgatgaggttatcgatgaacttctgacaaaagattattcctgtgacgtt
gccttgccccgtatcaagaaaagatggactcttgaatcccttggtacactggaaccaaga
agaagtgctttggaagatgattttgaggaagaggaagaaaaagaagaggatgaccaactc
atggatgaattagatgctggggctcatgaaaaggattattatcgtgggcgaagccctgca
agggagagagatagggatagaaagcgtgacagtcacagatatagagatcgagattatgat
agggaacgtggaagaggacgagaaagagatcgggaaagggaaagggacagagacagctat
agagacagggagagggagagggacagagacagggaccgctatcgtctgagagatgataaa
gaatatggtcgtgacagggagagggaaagggagagggaaggcagggagagggagaggcga
gacagggaccgtggcaggcggaggagccattcaaggagccgaagtaggagcaaggatcgt
aaggatcgcgagggtggagaccaccggaagaggcatgctcgcagcagcaccagtcctaga
aggcgtggagacatgccagaggatggaaccactcgagaagagccaaggaagaagaaagaa
aagaaggagaagaaggatgatggcactgaccacccagatccagagattgcagaagcaaac
aggttgcgggcatcccttgggcttaaacccttgaaactctaa

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