Vitis riparia (riverbank grape): 117931156
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Entry
117931156 CDS
T07274
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117931156
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117931156
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Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
117931156
NCBI-ProteinID:
XP_034707951
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Position
14:complement(15716067..15718680)
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AA seq
683 aa
AA seq
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MSIPILEACKKRKRRPKLFGFHTFADPGCPINPTSHFCDNIRIFLRECAELEDYNVDGMP
TWCTLLVNENRGFVVPVYTIEESVKYAAKPFCDHCRCTGWSNHFVSKRRYHIIIPIDDEW
NKPLDDGVFDLQTHLLHGMIHCNGFGHLLCINGIEGGSRYLCGREIMDLWDRICTILRTR
KITVEDSSKKRFMDLRLLHGVAYGHPWFGRWGYRFCHGSFGVKGPNYERAIEILSSLELD
QIIEDFGCTDRCMKIRQIFRFYRDLSETQLITLKDILRIMLTLKSRAPVQKKMNIVPDLP
ASSTLKPSTRRSLQNRPPLKDKTMKFKKFSTLITNMDSRWPARRLEYAADVIVNALREKR
ASECTHDGMTRQEVRDAARMHIGDTGLLDYVLKSMNNVIVGNHVVCRAVNPATRVLEYTL
KELGKGTLVSELESEMLPKPFPEQSIVPGADVYNDVIYLYRNVLLNYPDSELVELATRAV
LDSKHFVKEWPFSDEDDQLLRFVCHMMPSLSELEIFTRELPPGEFIVVPPYATVGELKET
VERTLRDTYCIMEQVVVTEIEDMEGMTDEEVLFGTIESGSEVWMRGTGMDLETELKYEGG
SDNWRVSCECGALDDDGERMVACDICEVWQHTVCSGIDDSETVPPLFVCPKCCALLVPAR
SESSDCGRMQLAPVHQLGMELLY
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataccgattctcgaagcctgcaagaagagaaagagacggccaaagctcttcggg
tttcacacctttgccgatcctggttgccccataaatcccacaagccatttttgcgataac
attcgaatatttcttcgagaatgcgctgagctcgaagactacaatgttgatggaatgccc
acttggtgtacgcttcttgtgaatgagaacagaggctttgtggttcctgtatataccatt
gaagagagcgtcaaatacgctgcgaagcctttctgcgatcactgtagatgcacaggttgg
agtaatcactttgtttcgaagagaagatatcatattataattcctattgatgacgagtgg
aataagccattggatgatggtgtttttgatctccaaacccacttgctgcatggtatgatt
cactgtaatgggtttggtcacctgctttgcatcaacgggattgaagggggttcaaggtat
ctctgcggcagagagatcatggatctctgggatcgaatttgcacaattcttcgaacccgg
aaaattacagtggaggattcctcgaagaagcgattcatggatcttcggttgctacatgga
gttgcatatgggcatccctggtttggtagatgggggtacaggttctgtcatggaagtttt
ggcgttaagggacctaattacgaaagagcaattgaaattctcagctcactggaactagat
cagatcatcgaagattttggttgcaccgacagatgcatgaaaatcagacaaatttttcga
ttctaccgagatttgagtgagacccagttgatcacactcaaagatatcctcaggatcatg
cttactctcaaatcccgagctcctgtccagaagaaaatgaacatagtgcctgatcttcct
gcttcttctactttgaaaccttccaccagaagatccctacaaaataggcctcctctaaag
gataaaacgatgaagtttaagaaattcagtacattaatcactaatatggacagccgatgg
ccggcaagaagattagaatatgccgcagatgtgattgttaatgcattgagggaaaagaga
gcaagcgagtgtacccatgatggaatgactaggcaggaagtgcgagacgcagctagaatg
cacattggtgacactggtttgctagattatgtgctcaaatcaatgaataatgtgatagtt
ggaaatcatgttgtctgtcgtgctgttaacccagccactcgggttttagaatacacactt
aaggaacttggtaaaggcactctagtcagtgaattggaatcagaaatgcttcccaagcca
tttccagagcaatctatagtacctggtgctgatgtatacaacgatgtgatttatttgtat
aggaatgtgctattgaattaccctgactcggaattggttgaattagcaactagggcggtt
ctggacagcaagcactttgtaaaggagtggccttttagtgatgaagacgatcagctactg
aggttcgtatgccatatgatgccaagtttgagtgagctagaaatttttacaagggagttg
cctcctggagagtttattgtggttccaccatatgctacagttggtgagctgaaggaaaca
gttgagaggacattgagggatacttactgtattatggagcaggtggtggtgactgagatt
gaagacatggagggaatgacagatgaggaagtgctttttggcacgattgagtcaggttct
gaagtttggatgagagggactgggatggatttggaaactgaattgaagtatgaaggcggg
tctgataattggagagtgagttgtgaatgtggggctttagatgatgatggggagaggatg
gtggcttgtgacatttgtgaggtctggcagcacactgtctgcagtggcatcgatgattct
gagactgtgccacccctgtttgtttgccccaaatgctgtgccttgcttgtgcctgcaaga
agcgagtcttctgattgtggacgcatgcagttggctccagttcatcagcttgggatggag
ttactgtactaa
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