Vitis riparia (riverbank grape): 117931173
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Entry
117931173 CDS
T07274
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117931173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117931173
Ion channels [BR:
vri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117931173
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117931173
NCBI-ProteinID:
XP_034707976
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Position
14:2299499..2304888
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AA seq
723 aa
AA seq
DB search
MNTAILTPASKFRPFRRRPSYAPITSDLNPYHILWRYQILEPDGDIVTYWNHVFLVTSLI
ALFLDPLYFFLPSVGGPACLTSDTSLGIVVTFFRTVSDLFYLLHMVMKFRTAFVAPSSRG
LGRGELVMDAHTIAMRYLKSDFIIDLAATLPLPQIVIWLVIPATKKDRADQTNNTLALIV
LIQYVPRLFLIFPLNRRIIKTTGVVAKTAWAGAAYNLLLYMLASHVRIQSPNRPLLHCFV
PFNWVLGASWYLLSMGRQHACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATR
VVANCDARGHDTEFKFGMFADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYI
GETTFCIVICIGGLVLFSQLIGNMQTYLQSMTVRLEEWRVKRRDTEEWMRHRQLPPALQE
RVHRFVQYKWLATRGVHEESILHWLPLDLRREIQRHLCLGLVRRVPFFAQMDDQLLDAIC
ERLTSSLSTEGTYIFREGDPVNEMLFIIRGQLESSTTNGGKSGFFNSITLRPGDFCGEEL
LTWALMPNPSINLPSSTRTVRSLCEVEAFALTAEDLKFVASQFRRLHNKKLQHAFRYYSQ
QWRTWGTCYLQDAWRRYKKRKLAKELARQESYNYMLIPDQEYNISDEPSDGNFVVGRDEN
ALTDNPNNVQHLGATILASKFAANTRRGVAQEVRVVEPAAPSLKMPRLLKPDEPDFSVGH
EDV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagcaattctcacgccggcctccaagttccgccccttccggcgacgaccctcc
tacgcgcccatcacctccgacctcaacccctaccacattctctggcgctaccaaattctc
gagcccgacggcgacatcgtcacttattggaaccacgtcttcctcgtcacctctctcatt
gcccttttcctcgaccctctctacttcttcctcccctccgttggcggtcctgcctgcctc
accagtgacaccagcctcggtattgttgttaccttcttccgtactgtttctgatctcttt
tacttgctgcatatggtgatgaagtttcggactgctttcgtggctcccagttcgagaggc
cttggtcgcggtgagctggttatggatgctcacacgatcgctatgcgttacttgaagtct
gattttattattgatttagctgccactctaccgcttcctcagattgtcatctggttggta
atacctgcaacaaaaaaagacagagcagatcagaccaacaacactcttgctctcattgta
ctcattcaatatgttcctagactgttccttattttccctttgaatcgtcggatcataaaa
actacaggagttgttgctaagactgcttgggcaggagctgcttacaatctccttctttac
atgctagccagtcatgtaaggatccagtctcccaatagacccttactccactgttttgtt
ccctttaactgggtattaggagcttcttggtatctattgtccatgggccgacagcacgcc
tgctggaaagcagagtgtgcaaaagaaagtgcagcaggaatttcattttgtctccctagt
tttctggactgtaaaagtttggaactagaagaacggcagtattggatgaatgctactcga
gtagttgctaattgtgatgctagagggcatgatacagaatttaagtttggaatgtttgca
gatgcttttactaatgatgttgcttcatcaaaatttattgagaaatacttgtattgcctc
tggtggggattaaaaaatttaagttcatatggacagactttggaaacaagcatttatatt
ggcgagacaacattttgcattgttatatgcattgggggtttagttctattttcacagttg
attggaaacatgcagacctatttgcaatctatgacggtaagacttgaagaatggagggtt
aagcgaagagatacagaggagtggatgaggcaccgtcaattgcctccagctttgcaagaa
cgggtacatcggtttgtgcagtacaaatggcttgcaacaagaggagttcatgaagaatca
attttgcattggttgcccctggatctccgtcgtgaaatacaaaggcacctatgtcttggc
cttgtccgccgtgtgcctttctttgcacaaatggatgaccagcttcttgatgccatttgc
gaacgcctcacctcatccttgagtactgaaggcacctatatctttcgagagggtgatcca
gtaaatgagatgctgtttatcattagaggacaactggagagctccacaaccaatggggga
aaatcaggattcttcaactccatcacccttagacctggtgatttctgtggcgaggaatta
ctgacatgggccttaatgcctaacccgagcataaacttgccgtcttctactcgaactgta
aggtctctttgtgaagttgaagcttttgcactaacagctgaagacctcaaatttgttgca
agtcagttcaggcgacttcacaacaagaaactccagcatgccttcaggtactattctcaa
caatggaggacatggggtacttgctatttacaagatgcttggagaagatataaaaagaga
aagctggcaaaggagttggctagacaagagagctacaactatatgctgatccctgatcaa
gagtataatattagtgatgagccatcagatggaaattttgtggttggaagagacgagaac
gcattaacagacaatccaaacaatgttcaacatcttggtgccacgattttagcttcaaaa
tttgctgcaaatacgagaagaggggttgctcaggaggttcgggtggtagagcctgctgct
cctagcttgaagatgccccggctgctaaagccagatgaacctgatttttctgtaggccat
gaggatgtttag
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