Vitis riparia (riverbank grape): 117931425
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Entry
117931425 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117931425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117931425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117931425
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117931425
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117931425
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117931425
Prokaryotic type
117931425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PCM1_C
DUF7040
YabA
Mis12
Motif
Other DBs
NCBI-GeneID:
117931425
NCBI-ProteinID:
XP_034708313
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All DBs
Position
14:27074139..27078878
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AA seq
447 aa
AA seq
DB search
MLDINLFREDKGHNPEIIRESQRRRYANVDLVDEVIHLDKEWRQRQFEYENLRKEFNKIN
KQVAKLKISGEDASEMIKSTDENKRLTAKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN
DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFXLKGDGVRLNQAL
INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND
SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS
NCXDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEPL
RPFMGGKTFLPFQTSPATEAKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaacctcttcagagaagacaagggccacaaccctgaaatcatccgcgag
tcccaacgacgtcgttacgccaacgttgatctcgtcgacgaagtcatccacctcgacaaa
gaatggcgccagcgtcaattcgagtatgagaatctccgtaaggagttcaacaagatcaac
aaacaagttgctaagctcaaaatttctggtgaggatgcaagtgaaatgatcaagagcaca
gatgagaacaagaggttaactgccaaaaaagaagctgaagttcaggaggctttagcagca
ctgaactcaaaattggaaataattggaaatcttgttcatgattcagttccagtgagcaac
gatgaggcaaataatgctgttattcggtcatggggtgagaaaaaagtggagccaaaacta
aagaatcatgttgagcttgttgaacttcttggaattgcagatttgaagaaaggtgctaat
atagcagggggtagaggtttcntactgaaaggagatggtgtacgtcttaatcaagccctc
atcaactttggtcttgattttttggagaaaaggggatatacagcattgcaaactccattc
ttcatgagaaaagatatcatggcaaagtgtgctcaattagcacaatttgatgaagaactt
tacaaggtaactggtgagggagatgacaaatatctgattgcaacagccgaacaacccctc
tgtgcttatcatttggatgattggatacatccttcccagttacccttaagatatgctgga
tattcatcttgttttcgtaaagaggctggatcgcacggtcgggatactttgggaatattc
cgagttcaccagtttgagaaagtggagcagttctgcattaccagcccaaatggaaatgac
tcttgggacatgcatgaggaaatgattaaaaactcagaggacttttacaagatgctaaac
attccctatcaagttgttgccattgtttctggtgccttgaatgatgcagctgcaaagaag
tatgatttggaaggatggttccctgcatcccagacttacagagagctggtctcgtgttca
aattgtnacgactaccagtccagaagattagaaattcgatatggacagaaaaagagcaat
gagcagataaagcaatatgttcacttgttgaactctaccctcacagcaactgagaggacc
atctgctgcatccttgagaactaccagaaggaagatggtgttgaggtaccagagcctttg
cgaccgttcatgggtggaaagaccttcctacctttccagaccagcccagcaacagaagcc
aaagggaagaaatccaaggcctag
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