Vitis riparia (riverbank grape): 117931442
Help
Entry
117931442 CDS
T07274
Name
(RefSeq) tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00260
Glycine, serine and threonine metabolism
vri00400
Phenylalanine, tyrosine and tryptophan biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01230
Biosynthesis of amino acids
Module
vri_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117931442
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
117931442
Enzymes [BR:
vri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
117931442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
117931442
NCBI-ProteinID:
XP_034708334
LinkDB
All DBs
Position
14:8169487..8172535
Genome browser
AA seq
495 aa
AA seq
DB search
MVQSLLSASLLSISSPSFSIKVGEQGKPMRLRASPRCRVRARAASSKAGPQAVEIPHQWY
NLIADLPVKPPPALHPQTQEPIKPEDLSPLFPDELIKQEASTDRFIAIPEEVIDVYRLWR
PTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNTAVPQVWYNAQEGVKSVTTETGAG
QWGSSLAFACSLFGLDCEVWQVRASYDQKPYRKLMMQTWGAKVHPSPSSITEAGRKILQM
NPSSPGSLGIAISEAVEVAAANADTKYCLGSVLNHVLLHQTVIGEECIKQMEAIGETPDV
IIGCTGGGSNFGGLTFPFIREKLKGRINPLIRAVEPTACPSLTKGVYAYDYGDTAGMTPL
MKMHTLGHDFVPDPIHGGGLRYHGMAPLLSHVYELGFMEAISIPQIECFQGAIQFARTEG
LIPAPEPTHAIAATIREALHCRETGESKVILTAMCGHGHFDLPAYEKYLQGNMVDLSFEE
EKIKASLANIPQVVA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtccctactctctgcaagtttactttccatttcttctccaagcttcagcatc
aaagttggggagcaagggaagcctatgcgcctgagggcttcacctaggtgcagagtcaga
gcaagagctgcatcttccaaggctgggcctcaagcagttgaaattcctcatcagtggtac
aatttaattgcagaccttccagttaaacctcctccagctctgcatccccagactcaggaa
ccaatcaaacctgaagatttgtctcccctgtttccagatgaattgatcaagcaagaggct
agcactgacaggttcattgcaatcccagaggaagttattgatgtttatcggctttggcgt
ccaacacctctgatcagagccaagaggttggagaagcttcttgacacacctgccaggatt
tattacaagtatgaaggtgttagcccagctggatcccacaaacccaacactgcagtccca
caagtctggtataatgcacaagaaggcgtcaagagtgttactactgaaaccggtgctggc
caatggggaagttcactggcctttgcttgcagcttatttggccttgactgtgaagtgtgg
caagttcgcgcttcttatgatcagaaaccatatcgtaaactgatgatgcaaacttggggt
gcaaaagtgcatccatctccatctagcatcactgaggcaggccgaaaaatccttcaaatg
aatccatcaagcccaggcagtttaggaatagctatttcagaggctgtggaggttgcagcc
gccaatgctgataccaagtactgtctgggaagtgttctcaatcatgttttgctacaccag
accgttataggcgaggagtgcataaaacagatggaagccatcggtgagaccccagatgtg
atcattgggtgtactggtggtggttctaattttggtgggctcacttttccttttattaga
gagaagctcaaagggagaatcaaccctcttataagggcggttgaacctacagcatgccct
tcattaacaaaaggtgtatatgcctatgattatggcgatacagcaggaatgactcctttg
atgaagatgcatacacttgggcatgacttcgttcctgatcctattcatggaggcggtttg
cgttaccatggtatggcaccattgctttcacatgtctatgaactgggtttcatggaagca
atctcaattcctcagattgaatgctttcaaggtgctatacaatttgctaggacagaagga
ttaataccagcaccggagccaactcatgccattgctgctaccatcagggaagctctccat
tgcagagagactggagaatcaaaggtcattctcacggcaatgtgcggacacggccatttt
gaccttccagcctatgagaagtatttgcaaggaaatatggttgatttgtcatttgaggaa
gagaagataaaagcatccctagccaacatccctcaagtggtggcctga
DBGET
integrated database retrieval system
