KEGG   Vitis riparia (riverbank grape): 117931463
Entry
117931463         CDS       T07274                                 
Name
(RefSeq) elongator complex protein 2 isoform X1
  KO
K11374  elongator complex protein 2
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vri03016]
    117931463
Transfer RNA biogenesis [BR:vri03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    117931463
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_HPS5 WD40_Gbeta WD40_RFWD3 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Smr Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 117931463
NCBI-ProteinID: XP_034708709
LinkDB
Position
1:3737969..3751317
AA seq 840 aa
MSVDGIGVERVFIGAGCNRIVNNVSWGACNLVAFGAENGVAIFCPKAAQILTTLPGHKAS
VNCTHWIPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADNKWRHVLQVPQPHKKGVT
CITGIMVSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESVFVGSKSMVALSLSE
LPGNTGHVVLAAGGLDNKVHLYCGERTGKQFVHACELKGHTDWIRSLDFSLPICTNDGTS
SLLLVSSSQDRGIRIWKMASCSSQSNSKGTFREEKISLASYIEGPVLVAGSSSYQISLES
LLIGHEDWVYSVEWQPPSVTSANGFAYYQPQSILSASMDKTMMIWQPERTTGIWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGIEYDNWQPQKVPSGHYAAVTDI
AWARSGEYLLSVSADQTTRIFASWQNEASLGGSDCWHEIARPQVHGHDINCVTIIHGKGN
HRFVSGADEKVARVFEAPLSFLKTLNHAISQKSSFPEDFQVDVQILGANMSALGLSQKPI
YVHSTHESPERNVNDGLDTLETIPDAVPVVLTEPPIEEKLAWHTLWPESHKLYGHGNELF
SLCCDQGGKLVASSCKAQSAKVAEIWLWQVGSWKAVGRLQSHSLTVTQIEFSHDDNLLLS
VSRDRQFSVFAIKRTGVDEVSHQLIARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWA
VDKGSSVKQLMTLPQFTSSVTALSWFALDHQRNNGFLAVGMESGLIELWSLTVTRTEDGS
MTVPGVTAALVRRLDPFMCHVSSVQRLAWRKSEASGDCKSVLLASCGADHCVRIFEVNVA
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgtctgttgatgggattggagtggagagagtgtttataggagcgggatgcaacagaata
gtaaacaacgtctcttggggcgcgtgtaatttagtcgcttttggtgccgaaaacggcgtc
gctatattctgccctaaggcagctcagattttgactacactgccaggtcacaaggcttct
gtcaactgcacccattggattccaagttctaaatttgcgttcaaagaaaaacagctagag
cggcattatctgctatctggtgatgcagatggtgttattctgttatgggaattatctctt
gcagacaataagtggaggcatgtgttacaagtaccacaaccacataagaagggtgttact
tgcattactggaattatggtttctgaaactgatgtgatatttgcatctacctcttcagat
ggaacaataaatgtgtgggaactgatccttccatccactattggaggtgactgcaaattg
tcatttctggaatctgtttttgttggttcaaaatccatggtggcgctttcattatcagaa
ttgcctggaaatactgggcatgtagtcctggcagctgggggcttagataataaagttcat
ctttattgcggggagaggacaggaaagcagtttgttcatgcttgtgagttaaaagggcat
acagattggatccggagtttggacttctccttgcctatatgcaccaatgatggaacaagc
agtcttttacttgtaagttcatctcaggacagaggcatacgcatatggaagatggcttca
tgtagttctcaatccaattctaagggtacatttagggaggaaaagataagcttggcatct
tatattgaaggtcctgtacttgttgctggctcatcctcgtatcagatatctctggaatct
cttcttattggacacgaggattgggtatattcagtggagtggcaacccccttcagtcaca
tctgcaaatgggtttgcctactatcaaccacaaagcatcttatctgcatctatggacaag
acaatgatgatctggcaacctgaaaggactactggtatctggatgaatgtggtcactgtt
ggggaattaagtcattgtgctttagggttctatggtggccattggagcccaaatggagat
tcaattttggctcatggttacggtggatctttccatctctggaaaaatgttggtatcgaa
tatgacaattggcaaccacaaaaagttccctctgggcactatgcagcagtgactgatatt
gcatgggccaggtctggtgaatatttgctctcagtcagtgctgaccagacaactcgaatt
tttgcatcttggcaaaatgaagctagtcttggaggtagcgattgttggcatgaaattgct
cgccctcaagttcatggtcatgacataaactgtgtgacaatcatccatggaaaagggaac
catcggtttgttagtggagctgatgagaaggttgccagagtgtttgaggctcctctgtct
tttctaaagacattaaatcatgccatttcacaaaaatctagttttcctgaagactttcaa
gtcgatgttcagattttgggtgcaaatatgtcagctttgggactatcacagaaacctatt
tatgttcattccacacatgagagtccagaaagaaatgtcaatgatggccttgacacactt
gaaaccattccagatgcagtaccagttgtgttaactgaaccccccattgaagaaaaattg
gcatggcatacactctggccagagtcgcacaaactctatggtcacgggaatgagctgttt
tctttgtgctgtgaccagggagggaagcttgttgcttcatcatgtaaggctcaatcagcg
aaagttgcagaaatatggctatggcaagtgggttcatggaaggcagttggtcgcttgcaa
tctcacagcttaacagtgacacagattgaattttctcatgatgacaatctgcttttgtct
gtctccagggatcgccagttttctgtttttgcaataaaaagaacaggtgtggacgaagtc
agtcaccagcttatagcaaggcaggaggcacacaaaagaataatatgggcatgctcttgg
aacccatttggtcatgaatttgcaacaggttcaagggacaaaactgtgaagatctgggct
gtagacaagggatcttcagttaagcagctcatgactttgccacagttcaccagtagtgtc
accgccttatcttggtttgctcttgatcatcagagaaacaatgggtttcttgctgttgga
atggaaagtggactcattgaattgtggagccttacggtgaccagaaccgaagatggtagc
atgacagtaccaggtgtaactgctgctcttgttagacggttggatccatttatgtgccat
gtttcctctgtgcagcgtttagcatggaggaagtctgaggcaagtggagattgcaaaagc
gtactgcttgcttcttgtggagctgatcattgtgtgagaatttttgaggtcaatgttgcg
taa

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