Vitis riparia (riverbank grape): 117931671
Help
Entry
117931671 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117931671 isoform X1
KO
K24155
rabconnectin-3a
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117931671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117931671
Membrane trafficking [BR:
vri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117931671
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117931671
RAVE complex
117931671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
117931671
NCBI-ProteinID:
XP_034708562
LinkDB
All DBs
Position
15:complement(3439155..3455313)
Genome browser
AA seq
2554 aa
AA seq
DB search
MKKKMQDSITAVDLPGHLPLQFVKSDPIPPAPTPSQFAVDWLPDFAGLSWVAYGASTLLV
ISHFPSPLSSEEALIGPIFRQVVEIAADESAAVSVVGWSPATPSVGELAAASGNCVCVFS
HDSERAEGSFCWSQTAVLVHSTKVEAIKWTGSGDGIIAGGTEVVLWKNKSRSWEIAWKFK
SEHPQTLVSATWSIEGPLASAAYHSKLHIGGWFSPFNEASKCVLVCYNDGNSEYVKTELR
HPQPVSMIQWRPSTRQQQSKGDAKYPMRHVLLTCCLDGTVRLWSEIDNGRVRKIGTETND
QKTVRRSFRVAAVIEINQTLNGTLGTNVFVTWATEIAGIIKTGEGANQIFSTKHHEHEKA
GKCEWLIGFGPGMFLTFWAIHCLDDFSPVRFPRVTLWKRQEVQGAEIGNFHNTGNSNSED
QSVLNKVVIMRNLLFGPPIACSLIQLLPCNSLCWSFLYTQAFNGKQDGSINKFTRENILS
CCSGATLNIDGHSGKILQVAVHPYSCKVELAASLDSNGLLLLWSLSTISNCILGLSTLNP
TWKLCGKFATQDSGSKYTSLHWAPSVLDEDCILLMGHAGGIDLFIVKVSQSEEEKVICYK
LCTIPFTKHGPCQDGPANVFSIPLLSACNKTFSSNKFMFLAVWMKPFQALSWAITLHSCD
LSGSCFGCSSDFGNTAENEEMRFENIFSGKKYSVLVNPCSSQFPDPHIHDQVTSYAVVCP
ANSIPSLQQGQVSSNDLHIDIPAYHMATGCSDGTLKLWRSNSSRLSNPHFLWELVGMFVA
HQGPVSAISLTDCRQKIATICMAGHLSTASTLRIWESVHLTGAGSFVLEDTISVDGDVVA
LSWLALGNGQLLLGVCMQNELQVYAQRRCGGQTLLSSGKSLELHIWFCMASARTFPSIHD
FLWGPKATAVVIHSNYFCLFGQWLLSVDRKDQSNCHPECTKGSPDFKFEADKDVLSIIST
DSGILDFKALSMEDSTEECKSKLPININMTGHLSSSLFAARTRMKYGSGAKLGFWSILEV
AEKLCGSLPVYHPEALLMNIYSGNWKRAYIALQHLVECLTSTHAPERRHSTAKSSHIIPQ
IHLSNYFEGHLSKASTDKGFQWSREDTLVTSSAQFQRGPIQFSYNSESDAPRNMFSSSST
KSELSRFVEPLEKFYELAAITSSEKMQILAIIDLLNEVNNPHAASAYGSLDEPGQRFWVA
VRFQQLCFARRFGRLASTDELVVDSGLIAWAFHSDCQENLFGSILPNDPSWQEMRTLGVG
FWFTNAQSLRTRMEKLARLQYLKNKDPKDCSLLYIALNRLKVLTGLFKISKDEKDKPLVG
FLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGGDTSSAITVCTKNLGDEQLALV
ICRLVEGHGGPLERHLISKFILPSAIEKGDYWLASIMEWELGNYFQSFLIMLGYQMDSVI
NKPALSSNHAAFLDPSIGRYCLTLATKNSMRNAVGEQNAAILGRWGTLMMATALRRSGLP
LEALELLSSSLSNLGAADQRSVSNVGKSEILHGILYPSPSDSSNWLSGDAAFYLESLARL
DLAMQYLSKLMREHPSCPEKVASGGCREYESHQYEISLEKFQHKLYGGLETFEQKFSLSG
DSLINKVLVALSNNSLLFIGYDVLHRYKSQDHSQDRIDTVHSSLLYSILPKQLLKATEEF
SHLFSRFIVACSITCSQQKSFSTENDMSGATMCGCIDAGCYHLQDLMLSLWSLRAILKIF
SVSCTDDVIKKPIILLDLIEYCLYFVCAWFQRNLNGLILMARPLLITYTDGHASCDIDME
NLKKALHQISESVDLNSLIDDVGVCQQVAKWMQDAQSGDILPSMPEDERKKILGVCIWHH
ISSSMIHLLNSLGDTSSWASSSTCCEPDGNSLMEKIKLVPLIFMKFLKTTVTYISSYHAK
QLASFLLQKIEDGLHVPTLEWLEKSSQSQPRSIQKNLNQGINLNIMNIEDKSSASEVIRD
IFADPKIISESFVQEKINWSQYVNGKPFKGWGDIYKGIMREHESAETSDQDGRHMSNSAS
SGTGSPVRSLFRSTHTFLGSGQKDTIFAKDDIPFQNPKEIFKRNGELLEALRINSVHQGQ
AVLAGHKKGIIFFNWEDELPFRDQSEYIWSEADWPQNGWAGSESTPVPTPVSPGVGLGSK
KGAHLGLGGATIGVGSLARPGRDLTGGGAFGIPGYAGMGASGLGWETQDDFEEFVDPPAT
VENISTRALSSHPSRPFFLAGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISA
VQFDHCGHRFATAALDGTVCTWQLEVGGRSNIRPTESSLCFNGHASDVTYVTSSGSIIAA
SGYGSNGVNVIIWDTLAPPSTSRASIMCHEGGARSLCVFNNVIGSGSISPLIVTGGKGGD
VGLHDFRYIATGRTKRHRHADKGEQSINSSLMANSQTGLPSKIGDQNLNGMLWYIPKAHL
GSVTKISTIPNTSLFLTGSKDGDVKLWDANRAKLVFHWPKLHERHTFLQPNTRGFGGVVR
AAVTDIQVVSHGFLTCGGDGSVKLIELRDSMQST
NT seq
7665 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaatgcaagactcaatcacagccgtagatttgcccggccatttgcctctc
caattcgtcaagtcggatccaatcccaccggccccgaccccatcccagtttgccgtcgat
tggctgccggactttgccggactctcatgggtcgcctacggagcctccacgttgctcgtg
atctcccactttccctctcctctctcctcagaggaagccctaatcggcccaattttccgg
caggtagtggagatcgcagccgacgagtccgccgccgtttcggtggttggttggtcgccg
gctacgccctcggtcggtgagctggcggcggcgtcggggaactgcgtctgcgtgttttcg
catgattcggagagggcggaaggttctttttgttggagccagactgcagtgcttgtacac
tctaccaaggtggaggctatcaagtggactggttctggagatgggataattgccggtgga
acagaggtggtcctctggaaaaacaagagcaggtcctgggaaatagcttggaagtttaaa
tcagaacaccctcaaacccttgtttctgcaacctggtccattgaaggaccgttggcttct
gcagcttatcatagtaaacttcatataggaggatggttttctccattcaatgaggctagc
aaatgtgtgttagtatgttacaatgatggaaattctgaatatgtgaaaactgagctacgt
catcctcagcctgtctcaatgattcagtggaggccatcgacaagacaacaacaatcaaag
ggagatgcaaaatatccaatgaggcacgtgctgctaacatgctgcttggatggaactgta
aggttgtggagtgagattgataatgggagggtcagaaagattggcaccgaaaccaatgat
cagaagactgtgagacgatcatttcgtgttgctgctgtgattgagataaatcagaccttg
aacggaactttgggaacaaatgtatttgtgacatgggcaacagaaattgcaggtataatt
aagacaggtgaaggagctaatcaaattttctctacaaaacatcatgagcatgaaaaggct
ggaaagtgtgagtggttaattgggtttggtccagggatgttccttactttttgggccatc
cactgccttgatgacttctcacctgtgagattccctcgagtgactttatggaagagacag
gaggtccagggtgctgaaataggaaattttcataatactggtaattcaaattctgaagac
caatctgttcttaataaagttgttattatgaggaatctgttatttggtccaccaatcgcg
tgctctttgattcagttattaccttgtaattctttatgctggtcgtttttatatactcaa
gcatttaatggtaagcaggatggatctataaataaattcacaagagagaacattttatca
tgttgttctggggctaccttaaatatagatggacatagtggaaagattttacaagttgca
gtgcatccttatagctgtaaagttgaacttgctgcttctttggattctaatggattgctt
ctactttggtcactttctaccatttccaactgtattttgggtctgtctacattgaatcct
acatggaaactttgtggaaaatttgcaactcaagattctggctccaaatatacgagcttg
cattgggcaccttcagtattggatgaagactgcatccttcttatgggacatgctggggga
attgatctctttatagttaaggtttctcaaagtgaagaggaaaaagttatatgttacaag
ttgtgcactatacctttcactaaacatggcccttgtcaggatggtcctgcaaatgtattc
tcaattcctctgctttctgcttgtaataaaacatttagttcaaataagtttatgttttta
gcagtatggatgaaaccttttcaggccctatcatgggcaatcactttgcattcctgtgat
ttatcaggaagctgctttggatgcagttctgactttggaaatactgctgaaaatgaggag
atgaggtttgagaatattttttctggtaaaaaatattctgttcttgtaaatccttgctca
tcccaatttccagatcctcatatccatgatcaggttacgagttatgctgtggtttgtcca
gctaattcaattccttcattacaacaaggtcaggtttcttctaatgatttgcacattgac
attcctgcatatcacatggccacaggctgctctgatggtactttgaaactatggagaagc
aactcttctagattatcaaaccctcattttctatgggagcttgtgggtatgtttgtggca
catcaaggacccgtcagtgcaatatctttgactgattgtcgtcagaagattgcaaccatc
tgcatggctggtcatttaagtactgccagcactcttcgtatatgggagtctgtacacctt
acaggtgcaggaagttttgtattagaagataccatttctgtcgatggagatgttgttgct
ctaagttggttagcattaggaaatggtcagttactgcttggagtttgcatgcaaaatgag
ttgcaggtgtacgcccagaggcgttgtggtggtcagactttgttaagctctggaaaatct
ctggaattgcatatttggttttgtatggcatctgctcgtactttcccttctattcatgac
ttcctttgggggcccaaggccacagctgtggtcattcacagtaactatttttgtctgttt
ggtcagtggttattaagtgtggataggaaagatcagtctaattgccacccagaatgtacc
aagggcagtcctgatttcaaatttgaagcagacaaagatgttctttctataatttccacc
gactctggcattcttgatttcaaagcattatcaatggaagatagtactgaagaatgcaaa
tccaagctgcctattaacataaatatgactggccatctatccagcagtttgtttgcagca
aggactcgaatgaaatatggttctggtgccaagctcggtttctggagtatactagaagtt
gcagagaaattatgtggatctttgcctgtttatcatcctgaggcgctcctgatgaatata
tattcaggcaattggaaacgtgcttatatagctttgcagcatcttgttgagtgtcttact
tctactcatgctcctgagagaagacattccactgcaaagtctagccacatcatcccacag
attcacttgtcaaattattttgaaggacatctctcaaaagcttcaactgacaaaggattt
caatggagtagagaggacactttagtcacatcgtctgcacagtttcagagaggtccaatc
cagttttcatacaattcagagtctgatgctcccaggaatatgttctcttcatcttctaca
aaatctgaactcagcaggtttgttgaaccacttgagaagttctatgaattagcagccata
accagctcagagaagatgcaaattcttgcgattattgatcttcttaatgaagtcaataat
ccccacgctgcttctgcctatgggagtcttgatgaacctggccaaagattctgggttgca
gtaagatttcagcaactttgttttgcccgaagatttggtcgactggcatccacggatgag
ttggttgttgactctggtctgattgcatgggcctttcactctgattgtcaagaaaattta
tttggttccatcctacctaatgatccatcttggcaagaaatgcggactctgggtgttggg
ttttggtttactaatgcacaatcattgcgtacaaggatggagaaactggcaagactacag
tatttgaagaacaaagatcctaaagattgttcacttctatatatagcattgaatagactt
aaagttttgactggtctctttaagattagcaaggatgagaaggacaagcccttggtggga
tttctttcacgcaattttcaggaggagaaaaataaggcagctgctctgaaaaatgcttat
gtcttaatggggagacatcagctggagcttgctattgctttctttctgcttggaggtgat
acttcttctgcaatcactgtttgtacaaaaaaccttggggatgaacagcttgctcttgta
atttgtcggcttgttgaggggcatggtggaccattggagcgtcatctaatatcaaagttt
atacttccctccgcaattgagaaaggcgactactggcttgcaagcatcatggagtgggaa
ctagggaattatttccaatcctttctgataatgcttggctaccaaatggattctgtgatc
aacaagcctgctctttcatccaatcatgctgcatttttagatccaagtattggacggtat
tgcttaacactagcaaccaaaaatagtatgaggaatgctgtaggggagcagaatgctgca
attctgggtagatggggaactttaatgatggctactgctttgagaagatccggccttcct
cttgaagccttggagctcctctcatcttctctgagcaatcttggggctgcagatcaaaga
agcgtatcaaatgttggaaaatctgaaattctacatggaatattatatccatcaccaagt
gattcctctaactggctgtcaggtgatgcggctttttatttggagtcccttgctagatta
gatttggcaatgcagtacttgtcaaaattgatgagggagcatccaagctgtccagaaaaa
gtagcatctggtggttgtagagagtatgagagtcatcagtatgagatatcacttgaaaaa
tttcagcataagttatatggagggcttgaaacatttgagcagaagttttctctgagtggc
gattctctgattaacaaggttttagttgcattatccaataacagtctattgtttattgga
tatgatgtattacacagatataaatctcaggatcattcacaagatagaattgatacggtt
cacagttctcttttatattctattctgcccaagcaacttttgaaggctactgaagaattc
tctcatttattttcacgatttattgttgcctgcagtataacctgctctcaacaaaaatct
ttttccacagagaatgatatgtctggtgcaactatgtgtggctgtattgatgctgggtgc
tatcacctgcaagatctcatgttgtcattgtggagtttaagagccattctgaagatattt
tctgtctcctgtactgatgatgtcatcaagaaaccaattatccttcttgatttgattgaa
tattgcctatattttgtatgtgcatggtttcaaagaaatttgaatggtctcattctgatg
gcaagacctctcttgatcacatatactgatgggcatgcttcatgcgatattgacatggaa
aatctgaagaaggcccttcaccagatttcagagtcagtagatctcaattcattgattgat
gatgtaggagtctgccagcaggttgctaaatggatgcaagatgcacaaagtggagatata
ctgccttccatgccagaagatgaaagaaagaaaattctaggggtgtgcatctggcaccac
atatcaagttccatgatacatctgcttaattccctgggtgacacttcttcctgggcatca
agttctacatgttgtgaacctgatggcaactctttaatggaaaagatcaaattggtcccc
ctgatctttatgaagttcctaaaaaccacagtcacatatatttcttcttatcatgcaaaa
caacttgcatcgtttctgttgcagaaaattgaggatgggctacatgtaccaactcttgaa
tggttagaaaaatctagtcaatctcaacccagatccatccagaagaatctgaatcagggt
atcaatttgaacataatgaacattgaagataagtcatcagcttctgaagtaatacgggat
atctttgctgatcctaaaattatatctgaaagttttgtgcaagaaaaaataaattggtca
cagtatgtgaatggtaagcccttcaaaggatggggtgacatatacaaaggcatcatgagg
gagcatgaaagtgcagaaacttctgatcaagatggtaggcatatgagtaattctgcaagt
agtggaactggatcacctgttagaagtctgtttcgaagtacccatacttttcttggttct
gggcagaaagatacaatctttgcaaaggatgatattcctttccaaaaccctaaagaaatt
tttaagagaaatggagaactattggaggcattgcgcatcaactccgttcatcagggtcaa
gctgtccttgctggccacaagaagggaataattttctttaattgggaagatgagctgcct
ttcagggatcaatcagaatatatttggtcagaggctgattggccacagaatgggtgggct
gggtctgaatcaaccccagttccaacacctgtttctccaggtgttggtcttgggagcaag
aagggggcacaccttgggctgggtggagcaaccattggtgttggttctttggccagacca
gggagagacttaacaggtggcggtgcatttggaattcctggttatgccggtatgggtgca
tctggcttaggctgggagactcaagacgattttgaagagtttgttgatccaccagccact
gttgaaaatattagtacaagggctttatcaagtcacccctctaggcctttcttcttagct
ggctctagcaacacacacatctacttatgggagtttggcaaggacaaagctactgcaact
tatggtgtgcttccagctgcgaatgtccctccaccttatgctcttgcatcgatatcagct
gtgcagtttgatcactgtggacatagattcgctactgctgcattagatggaactgtatgc
acttggcagcttgaggtgggaggaaggagcaacatccgtccaacagaatcatctctttgc
tttaatggccatgcatcggatgtcacttatgttacttcaagtggatccatcattgctgca
tctggatatggctccaatggtgttaatgtgattatatgggacacattggctccaccctca
acctctcgagcttccattatgtgccatgaaggcggtgcccgctccctttgtgtgttcaac
aatgtcattggaagtggttctatttctccccttattgtgactggtggaaaaggtggtgac
gttggacttcatgacttccgctacatagcaaccggaaggactaaacggcataggcatgct
gataagggtgaacaaagcattaactcatctttgatggctaactcccagacagggttgcct
agtaaaattggggaccaaaatttaaatgggatgctttggtatataccaaaggctcactta
gggagtgttaccaaaatatctaccatcccaaataccagtttgttcttaacgggaagcaaa
gatggagatgttaaactttgggatgctaatagagccaagttagtttttcattggccgaaa
ttgcatgaaagacacacctttctgcagccaaacacacgtggctttggtggagttgttagg
gctgctgttacagatatacaagttgtttctcatggttttctgacatgcggtggcgatggc
tctgtaaaactgattgagctcagggattctatgcagagtacatga
DBGET
integrated database retrieval system
