Vitis riparia (riverbank grape): 117931709
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Entry
117931709 CDS
T07274
Name
(RefSeq) protein transport Sec1a-like isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117931709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117931709
Membrane trafficking [BR:
vri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117931709
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117931709
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117931709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Tir_receptor_N
Motif
Other DBs
NCBI-GeneID:
117931709
NCBI-ProteinID:
XP_034708623
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Position
15:5656183..5673293
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AA seq
665 aa
AA seq
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MSMSDFDFSSNAGEYKNFRQISRDRLLHEMLRSTKTGDSKSTWKVLIMDKVTTKVMSSSC
KMADITDEGISLVEDLYRRRQPLPSLDAIYFIQPSKENVVMFLSDMSGRVPLYKKAFVFF
SSPIPKDLVNHIKSDTSVLPRIGALREMNLEYFPIDSQAFITDHERALEELLGENVENTR
KFDNCLNTMATRISTIFASLKELPLVRYRAAKTLDGSAVATFRDLVPTKLAAAVWNSLEK
YKSTIPNFPQTGTCELLILDRSIDQIAPVIHEWTYDAMCHDFLDMDGNKYVHEIPSKTGG
EPEKKEVLLEDHDPVWLELLHVHIADASERLHDKMTNFVSKNKAAQLHQRDSNELSTRDL
QKMVQALPQYSEQMEKLSLHVEIAGKINRTIREMGLRDLGQLEQDLVFGDVGAKEVINFL
RTKQDATSENKLRLLMIYASVYPEKFEGDKGLKLMQLARLSPEDMKVVNNMRLLEGSSAT
KKKSSGGFSLKFDGQKVKNAARKDRTTEEETWQLSRFYPMIEELIEKLNKGELPKNEYLC
MNEPSPPVPRSTDGASARTSQAPASQPVKSRRTATWARSRVSDDGCSSDSVLKNVSVDFK
NMGQRIFVFIIGGATRSELRVCHKLTAKLRREVVLGSSSIDDPPQFITKLKMLSEKDISL
DGIRI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcggactttgatttttcgtcaaatgccggagagtacaagaactttcgtcaa
atcagccgcgatcgtttactacatgaaatgctcagatcaactaaaactggggattcaaaa
tcaacttggaaagtactcatcatggataaagttactacaaaagtcatgtcttcctcatgc
aaaatggcggacataacagatgaaggaatttccttggttgaagacctttataggagaagg
caaccattgccctccttggatgctatatatttcatccagccttcaaaggagaatgttgtc
atgttcttgtctgacatgtcgggaagggtgcctttatacaagaaagcatttgtattcttc
agttcccctattccaaaagatctggttaatcacatcaagagtgatacaagtgttctaccc
cgcataggtgcattaagagagatgaatttggagtactttcccatagacagtcaggctttt
attactgatcatgaaagagcactggaggagctcctgggggaaaatgtggagaatactcgc
aaatttgataattgtttgaacacaatggccacccgaatatccactatttttgcttcgcta
aaggagcttcccttagtacgatatcgtgctgccaagacccttgatggatctgcagtggca
acatttcgtgacttggttcctacaaagcttgctgctgctgtttggaactctcttgaaaaa
tataaatctactattcccaactttccccagactggaacatgcgagctccttatcttggat
agatctatagatcagatagctcctgtcatacatgaatggacctatgatgccatgtgccat
gattttctggatatggatggaaataaatatgtacacgagattcctagcaaaacagggggt
gaacctgagaaaaaggaggtccttttagaagatcatgatcctgtctggctcgagctcctc
catgtacatattgccgatgctagtgaacggttgcatgataaaatgaccaactttgtctca
aagaacaaagctgcacaactccatcagagagacagtaacgaattatctacacgagacttg
cagaaaatggttcaagctttgccacagtatagtgaacaaatggagaagctttctctccat
gttgagattgctggtaaaatcaacagaactatccgagagatgggacttcgagaccttggg
caactggagcaggatcttgtctttggagatgtaggagcaaaggaagtgataaacttttta
aggacaaagcaggatgctacttctgaaaataaattgcgtctgttgatgatatatgcttcc
gtttatcctgagaagtttgaaggtgacaaaggtttaaagctaatgcagttagcaagatta
tcacccgaggatatgaaagttgtgaataacatgagactgcttgagggatcatcggctacc
aagaagaagtccagtgggggtttctcacttaagtttgatggtcagaaggtaaagaatgca
gctagaaaagatcgaaccactgaagaggaaacgtggcagttatcacgattttatcccatg
atagaggagctgattgaaaaactcaataaaggtgaattacccaagaatgaatatctgtgt
atgaatgaaccaagtccacctgtcccacggagcactgatggtgcatctgcacggacgagt
caagctccagcttctcagccagtaaaatcaagacgaactgcaacttgggcacgttctcgt
gtttctgatgatggatgttcaagtgactcagttttgaagaatgtgtctgtggatttcaag
aatatggggcagcgaatttttgtctttatcattggaggagcaacgcgatctgagctgcgg
gtttgtcacaagctcacagccaaactgaggagggaagttgtcctaggctcctctagtatt
gatgatcctccacaatttattacgaaactgaagatgctgtcagaaaaggatatctcatta
gatggcattagaatctaa
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