Vitis riparia (riverbank grape): 117931780
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Entry
117931780 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117931780
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117931780
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117931780
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117931780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117931780
NCBI-ProteinID:
XP_034708737
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Position
15:complement(1785666..1790319)
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AA seq
597 aa
AA seq
DB search
MLGGSTFAKTICTICYEDLKPIVEDLQSISVCGHVFHELCLQQWFEYCANKKKNSCPVCK
QTCSLNGVNRLYFQSIGDASDPTVSQKPLNIEEDPGALRREVKRLEVKVAGLTSVWERNQ
KDLKELNEELCLCKEQFKEEAALKNETLKQKAFIQQLLYSKSQDLDKSNLECSRLQERNM
ALAKELAALKLVSDLSLDEEGVLKLASFGNEANNKDTIDILKRSLVIRNKSYKELMAKCN
LLGRGEARSVRKLEKAKGKIQKLKTRVQELETAIEVKDNEVLRALIASKKRIDEEANLKS
IKCQFSSSPINDFSPEDCMDQPAVPISKSDQIGNLNNGLLSSKTAGNSNSIKYTSVNYSK
SNVNVVALDQDIDSYLLIDEDVLEISAAMHELPDPYLKPKSTKAVAVQNSSILVPGAASD
ISRKPLAQGPGNSIGLSGSRTSTEKDMYDAPVAAEDKHVKLLVDDIEQLQPLPQIRKEAP
FPIRFAKPGDKCFAPGLIGPDGTPRYLGKWCKRDKANGSNPSSVGMQGSSTSTGDLIAVG
ADGKGGRIKVLRSHNQPSVDRKETSAWAKRCKLGTKTNGLQSQGCLQIEHFFSKTGR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctcggaggtagtacattcgccaaaacaatatgcacgatctgctacgaagatctcaag
ccaatcgtcgaagacctccaatccatctccgtctgcggccatgtcttccacgaactctgt
ttgcaacagtggttcgagtactgcgcgaataagaagaagaacagctgtcctgtgtgcaag
cagacttgttctttaaatggtgttaatcggctttactttcagtcaatcggcgatgcgagc
gatccgaccgtatctcagaaaccgcttaatatcgaggaagatccaggggcattacgtaga
gaggtcaagagattggaggtaaaggtagcgggtctcacttccgtttgggaacggaaccag
aaggatctcaaagagctcaatgaggagctgtgcctttgcaaggagcaatttaaggaggag
gcagcgctgaagaatgaaaccttgaaacagaaagcgttcattcaacagttgctttattca
aaatctcaggatctggataaatcaaacctggagtgttcaagactgcaggagagaaacatg
gccttggctaaagagcttgcagcacttaaattggtatctgatctgagcctggatgaagaa
ggggttttgaagctggcttcttttggtaatgaggctaataacaaggatacaatagacatt
ctaaagaggtcactggtcattcgtaacaagagttacaaagaattgatggcaaaatgcaat
cttctaggaagaggagaggctcgctctgttagaaaacttgagaaggctaaagggaagata
caaaaactaaagacaagggttcaagagttggagacagccattgaagtgaaagacaatgaa
gttttgagagctttaattgcttccaagaaaagaattgatgaagaggctaatctgaaaagt
attaaatgtcagtttagttcttcaccaatcaatgatttttcaccagaagattgcatggat
caaccagctgtacccatatctaaatcagatcagattgggaacttgaacaatggcctgctt
tcttccaagacagcaggaaattcgaattccatcaaatatacgagtgtaaattacagcaaa
agcaatgttaatgttgtggctctagatcaagatatagattcttaccttctaatagacgaa
gatgttttagaaatttctgcagctatgcatgagcttccagatccttatttgaaacctaaa
tccaccaaggctgtggctgttcagaactccagcatattagttcctggggcagcctctgat
atcagcagaaaacctttagcacaaggaccaggtaacagcattggactttcaggttcaagg
actagtaccgagaaagatatgtatgatgctcctgttgctgctgaagacaagcatgtaaag
ttacttgtagatgacattgaacaacttcaacctttacctcagataagaaaagaggctcct
tttccaattcgatttgccaaaccaggagataaatgctttgctcctggactgattggtcct
gatggaacacccaggtacttaggaaaatggtgcaagcgggacaaggccaacggatcaaat
ccatcatctgtaggcatgcaaggatcaagcacaagcactggtgatttgattgctgttgga
gctgatgggaaaggtggtagaatcaaagttctgagatctcacaatcagccttcagtggat
aggaaggagacttccgcgtgggcaaagagatgcaaacttggaaccaagacgaatggtttg
cagtctcaggggtgcttgcagatagaacattttttctcaaaaactggtcgataa
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