Vitis riparia (riverbank grape): 117932113
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Entry
117932113 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117932113
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117932113
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117932113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_5
Rad50_zn_hook
RING_XB3-XBAT31
zf-RING_UBOX
Prok-RING_4
zf-rbx1
zf-RING_6
CdaS_N
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117932113
NCBI-ProteinID:
XP_034709050
LinkDB
All DBs
Position
15:7879750..7915675
Genome browser
AA seq
878 aa
AA seq
DB search
MGSTGEPDRKRRHFSSLSPTAATAKKMPFLPVSEDKKLDTAVLQYQNQKLKQKLEAQKVE
CSALENKFSQLKETQQSYNATLTMVNKTWRELVDNLETCSVHLKDSASAGRHVKLPSTTE
DGNSCLQDAFLSRLIETGATESCSANDFSDRMEEDRPTSCGKTKNSLSNIVSTINDLWCL
KDGLYAAVLEALPEDGLCYKKISSDLHAEVNNMRLAFGDLHLKHKSVTRDMQSHRDVDAK
NKAELKRLRGELESTVAELEESNCKLVTLKAERDAAKGAFFPILSLGSKNVAGDKARDKQ
KDLHDMEATLKELLDQSSSRLLELKALYEERIGILKQLSNLQNTLKNVKCISSSSAYVLV
RDQLEKSKAEVVHYQALFEKLQVEKDNLVWREKEVNMKNDFVDVFRRSSVVTDSRLSELR
IEIQNQINERNLIEIKLEEASREPGRKEIIAEFKALLSSFPDNMGTMQNQLRKYKDAASD
VHSLRADVQSLSSVLERKEKELETLSTRSADQVADIRKLQALIQDLEESDIQLKLILEMY
RCESVDSRDVLEARDKEYKAWAHVQSLKSSLNEHSLELRVKTAIEAEALSQQRLAAAEAV
IVDLRQKLEASKRDMFRLSDVLKSKHEENEAYLSEIETIGQAYDDMQTQNQHLLQQITER
DDYNIKLVLEGVRSRQLQDSLLMEKQTMERGFQRATTSLGFFDMKAGRIEDQLKMCSDQV
QKLAEDRLQSLGTLANFQKRLLDVTRLSQQARESLEESQSKVDKSRVSLGELQIELEKER
FEKKRTEEELEVVRRKASRLRAQTEGSSIVDKLRQELREYRDILKCGICHERPKEVVITK
CYHLFCNPCVQRIIEARNRKCPVCSASFGPNDVKPVYI
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacaggtgaaccagaccgaaaacgacgtcactttagctctctatcgcccacg
gctgctactgctaagaagatgccattcttgcccgtatcggaagataaaaagcttgatact
gctgtacttcagtatcaaaatcaaaagctaaaacagaagttagaagctcagaaggttgag
tgttctgctcttgagaataagttcagccaactgaaggagacacaacagtcatataatgcc
acattaacaatggttaataaaacttggagagagctggttgataacttggaaacatgttct
gtccacctaaaggactcagcaagtgctggacgacatgttaaacttccttcaacaacagag
gatggaaactcttgcttacaggatgcttttctcagccggctcatagaaacgggtgcaact
gaaagttgctctgcaaatgacttttctgatcggatggaagaagacagaccaacatcctgt
ggaaagactaagaacagtttaagtaatattgtatctaccattaatgatctgtggtgtttg
aaggatggattatatgccgcagttttagaggcacttccagaagatggtttatgctacaaa
aagatatccagtgatttacatgcagaagttaataacatgagattggcatttggtgatctt
cacttgaagcacaaatcagtcacaagggacatgcagagccatcgggacgtagatgccaag
aataaggctgagcttaaacgtttaagaggggaattggagagcactgttgcagagctggaa
gaaagtaattgtaaattggtaactcttaaagcagagagagatgcagctaaaggggcattt
ttccccatcttaagcttggggagtaaaaatgttgcaggagataaggccagagataaacaa
aaagatctgcatgatatggaggctacactcaaggagctattggaccaatcttcatctcgc
ctactagaactgaaggctctttatgaagaaaggataggaatattaaagcaactatctaat
ttgcagaacactttgaagaatgtgaagtgcatttcgtcttcttcagcctatgtcttggta
agagatcaactggaaaagtcgaaagcagaagttgtccattatcaggccttatttgagaaa
ctacaggttgagaaggataaccttgtctggagggaaaaggaagtgaatatgaaaaatgac
tttgttgatgtttttcgaagatcttctgtagttactgattctagattatcagagctcaga
atagagatacagaatcaaattaatgaaagaaacctgattgaaattaagctggaagaggca
tcaagagaaccaggaagaaaagaaatcattgcagaatttaaagccctactttcttcattt
cctgacaacatgggcactatgcaaaatcaacttcgtaaatacaaagatgctgcttccgat
gttcactctctgcgggctgatgtgcagtctctatccagtgttcttgagaggaaggaaaaa
gagttggaaactttatccactagatctgctgaccaggttgctgatatacggaagttgcaa
gctttgattcaggacttggaggagagtgatatacaattgaagcttattttggaaatgtat
agatgtgaatctgttgattcaagggatgtcttagaagctagggataaagaatacaaggca
tgggctcatgtgcaaagcctcaagtcttctctcaatgagcatagcctggaattgcgagtt
aaaacagcaattgaagctgaagccttatctcagcaaaggctagctgctgctgaagcggtg
attgttgacctgagacagaagttggaagcttctaagagggatatgtttagactctcagat
gtcctgaaatccaagcatgaggaaaatgaagcctacttatctgaaatagaaacaattggg
caggcatatgatgatatgcagactcaaaaccaacacctattgcagcaaatcactgagaga
gatgactataacattaagcttgttttagagggtgtgaggtcaagacagctgcaggattct
ctactgatggaaaaacaaaccatggagaggggatttcaacgagccactacatctcttggt
ttttttgacatgaaagctggaagaattgaagatcagttgaagatgtgctcagatcaggtt
caaaaacttgcagaagatagattgcaaagcttaggtactttggctaatttccaaaaaagg
ttactggatgtgactagattatctcagcaagcaagggagtcactggaggaatcacaatcc
aaagtcgacaagagtcgagttagtcttggagagctgcagattgaactagagaaagagagg
tttgaaaagaaaagaacagaggaggaattggaagttgtaaggagaaaggcttcgcgtctt
agagcacagacagaggggtcatcgattgtggacaagcttcgacaggaactcagagaatac
agggatatactgaagtgcggtatatgccatgagaggccaaaagaggttgtcatcacaaaa
tgctatcacttattctgcaatccctgtgtgcaaagaattattgaagctcgtaaccgcaag
tgtcctgtatgttctgcaagttttgggcccaatgatgtcaaacccgtttacatctga
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