Vitis riparia (riverbank grape): 117932131
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Entry
117932131 CDS
T07274
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117932131
Membrane trafficking [BR:
vri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117932131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
117932131
NCBI-ProteinID:
XP_034709080
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All DBs
Position
15:complement(2142420..2157976)
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AA seq
1126 aa
AA seq
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MYMAYGWPQVIPLEQGLCPTSEQIVYLKLVNRLLLVVAPSHLELWSCSQHKVRLGKYKRD
ADSIQREGENMKAVWSPDAKLIAVLTSSFFLHIFKVQFTEKKIQIGGKQPSGLFLATISL
LLSEQVPFAKKDLTVSNIVSDNKHMLLGLSDGSLYTISWKGEFCGAFELDSPMHDSNKVS
ELSHSLDNGVSSRGAPGVVSTSTHNTSQQSAVIQLELSLLLRLLFVLYSDGQLVLCSVSK
KGLKQSELIKAETRLGSGDSVCASIASEQQILAVGTRRGVVELYDLAESASLIRTVSLYD
WGYSMDDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQMGLSSVSSPVVK
PNQDCKFEPMMGGTSLMQWDEYGYRLYAIEERCIERIVAFSFGKCCLNRGVSGTTYVRQV
IYGEDRLLVVQSEDTDELKIFHLNLPVSYISQNWPVQHVVASKDGMYLAVAGLHGLILYD
IRLKKWRMFGDISQEQKIQCNGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLGR
KTLLAKPMVMDVYQDYILVTYRPFDVHIFHVKLSGELTPSRTPDLQLSTVRELSIMTAKS
HPSAMRFIPDQLPREYILKNHISSSSDLLAREPARCLILRVNGELSLLDLDDGRERELTD
SVELFWVTCGQSEEKTNLIEEVSWLDYGHRGMQVWYPSPGVDPFKQEDFLQLDPELEFDR
EIYPLGLLPNAGVVVGVSQRMSFTSGTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALR
LAQLSAEKPHFSHCLEWLLFTVFDAEISRQNSNKSQVSGPKGGGKFSLLEKTCDLIKNFP
EYLDVVVSVARKTDGRHWANLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVS
QYCALRLLQATLDESLYELAGELVRFLLRSGREYEQASTDSDKLSPRFLGYFLFRSNSRR
QSSDSKSPSFKEQSAHITSVKNILENHANYLMSGKELSKLVAFVKGTQFDLVEYLQRERY
GFARLESFASGLELIGEKLEMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLL
DLFRHDNRLWTAYGATLQSQPAFAEYHDLLEALEERLKCSDNLEEK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtatggatggcctcaggtcatccctctcgaacaaggcctgtgccctaca
tctgagcagatcgtatacctcaaactagtgaatcgcttgttgcttgttgtggctccctct
catctcgagctctggagctgttctcagcataaagtgagattgggaaagtacaagagggat
gcggattcgattcagcgggagggtgagaatatgaaggctgtgtggagtcctgatgccaaa
ttgattgcagttctcacatcttcgtttttccttcacatttttaaggttcagttcacggaa
aaaaaaatacaaattggagggaagcagccatctggcttgtttcttgcaactatttctcta
cttctcagtgagcaggtgccctttgcaaaaaaggacttgacagtgagcaatattgtgagt
gataacaaacatatgctccttggactctcagatggatctttatatactatttcctggaaa
ggggagttttgtggggcctttgaacttgattcccctatgcatgacagcaataaagtttct
gaattatcacattctctagacaatggtgtttcttcaagaggggctccaggagtagtttct
acatccactcataatacatcccaacaatctgctgttattcagctggagctttccctacta
ttgaggttattgtttgtgctttactctgatgggcaattggtgttatgttctgtaagtaag
aagggcttaaaacaatccgaattaatcaaagcggaaacaaggttgggttctggtgattct
gtatgtgcttcaatagcttcagagcagcaaatcctggctgtaggtaccagaagaggtgtt
gttgagctatatgaccttgctgaatctgcatcacttattcggactgtatcattgtatgat
tggggttattcaatggacgatactggtccggtaagttgtattgcatggacacctgataat
tccgcttttgctgttggatggaagttaagagggcttacagtttggtctgtttctggctgt
cgtttgatgtctacaatacgccaaatgggtttaagttcggtatcttctccagttgttaag
ccaaaccaagattgtaaatttgaacctatgatgggtggtacctcactgatgcagtgggat
gaatatggatataggctttatgctattgaggaaagatgtatagagagaattgttgcattt
tcttttggtaaatgttgccttaacagaggagtttcaggcacgacttatgtccgccaagtg
atctatggtgaagatcgtttgcttgttgtgcagtcggaagatacggatgaacttaaaatt
tttcaccttaaccttccagtttcttatatctcccaaaattggcctgttcaacatgtggtg
gctagcaaggatgggatgtacttagcagttgctggtctccatggcttaatcttatacgat
attcgtctgaaaaaatggcgaatgtttggagatatttcccaggaacaaaagatccagtgc
aatgggttgttgtggctgggaaaaattgttgttgtctgcaactatgttgattcttctaac
acgtatgaattgcttttctatccaagatatcaccttgatcagagctcactacttggtcgg
aaaaccttgcttgccaagcccatggtgatggatgtctatcaggattatatacttgttact
tatcgcccatttgatgtgcatatattccatgtgaaattatctggtgaattgacaccttcc
aggactccagatttgcagctttctacagtacgagagctctctatcatgactgcaaagagc
catccttcagcgatgcgttttatccctgatcagcttccaagagagtacatcctaaagaat
cacatttcatcctcatcagatttattggccagagagcctgccagatgtttgatattgaga
gtgaatggggagctttcactacttgacctggatgatggacgtgaaagagagctcacggat
tctgttgaattattttgggttacctgtggtcaatcagaggaaaaaacaaacctaattgag
gaagtttcatggttggattatggccatagaggaatgcaggtttggtatccatctccaggt
gttgacccttttaagcaggaggatttcttgcagttggatcctgagctggaatttgaccgt
gagatataccctcttgggcttcttccaaatgctggggtggttgtgggtgtttcccagaga
atgtcatttacatcaggcacagagttcccatgttttgagccatctcctcaagctcaaact
attctgcattgcctactccggcaccttcttcagagggacaagagcgaggaagcattacgt
ttggcacaattatcagcagagaagcctcatttttcccattgtctggagtggcttcttttt
actgtatttgatgctgaaatttccaggcaaaactcaaataaaagccaagtttcaggccct
aaaggtggaggcaagttctctcttttggagaagacctgtgatttaataaaaaactttccg
gagtatcttgatgtggttgtaagtgttgcaagaaaaactgatggtagacactgggcaaat
ttgttcgctgctgctggaagatcgacagagttatttgaggaatgcttccaacggagatgg
tacagaactgcagcttgctatatacttgtgattgctaaacttgagggccctgccgtgagt
cagtattgtgctttacgtttattacaggcaacccttgatgaatctttatatgaactagct
ggcgagctggtaaggttcttgctgagatccggaagggaatatgaacaggcatcaacagat
tcagacaaactctctcccagatttttgggctattttcttttccgttctaacagtaggaga
cagagttcggattcaaaaagcccctcatttaaagagcagagtgcgcatattacatctgtc
aaaaacatcctagaaaaccatgctaactatttgatgtcaggaaaagaactttccaaactt
gttgcatttgttaaaggcactcagtttgatctagtggaatatcttcaacgagaaaggtat
ggatttgctcgcttggagagctttgcttcagggcttgaactaatcggggaaaagcttgaa
atgggtacgctgcagagccggctggatgcagagttccttttggctcatatgtgctcggtt
aagtttaaagagtggatagttgtcctggctactcttctaagacgatctgaggtcctttta
gatcttttccggcatgataatcggctatggactgcatatggtgcaactctgcagtcacaa
cctgcatttgctgaataccatgatttgcttgaagcattggaagaaagactcaagtgtagt
gacaatttggaagagaaatga
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