Vitis riparia (riverbank grape): 117932216
Help
Entry
117932216 CDS
T07274
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04016
MAPK signaling pathway - plant
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
117932216
04075 Plant hormone signal transduction
117932216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117932216
Transcription factors [BR:
vri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117932216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
Troponin
bHLH_INO4
DUF7050
bHLH_SAC51
DMPK_coil
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
117932216
NCBI-ProteinID:
XP_034709230
LinkDB
All DBs
Position
2:11170501..11173114
Genome browser
AA seq
663 aa
AA seq
DB search
MTEYRVPTMNLWTDDNASMMEAFISSDLSSFSWGPSSAASTSTPAPDPSRNLAQSQPSMA
VFNQETLQQRLQALIEGARESWTYAIFWQSSVDFSGASLLGWGDGYYKGEEDKGKRKMTP
SSVSEQEHRKKVLRELNSLISGTVSSSDDAVDEEVTDTEWFFLVSMTQSFVNGAGLPGQA
LFNSSPVWVVGTERLMSSPCERARQAQVFGLQTMVCIPSANGVVELGSTELIYQSSDLMN
KVRVLFNFNNLEVGSWPIGAAAPDQGESDPSSLWISDPTSNVEIKDSVNTTATGASNPIG
NQQNSKSIQFENPSSSSLTENPSIMHNPQQQQQIHTQGFFTRELNFSEFGFDGNNGRNGN
LHSLKPESGEILNFGDSKRSSCSANGNMFSGHSQVVAEENKKRRSPTSRGSAEEGMLSFT
SGVILPSSCVVKSSGGGGDSDHSDLEASVVREADSSRVVEPEKRPRKRGRKPANGREEPL
NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQSAESDKEDL
QKEVNSMKKELASKDSQYSGSSRPPPDQDLKMSNHHGSKLVEMDIDVKIIGWDAMIRIQC
SKKNHPAAKLMGALKELDLDVNHASVSVVNDLMIQQATVKMGSRFYTQDQLRLALSSKFA
DSR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatatcgtgtgccaaccatgaatctgtggaccgacgataacgcttctatgatg
gaggcttttataagctctgatctctcttcctttagttgggggccatcctccgctgcttct
acgtctactcctgcgcctgacccctcaaggaatctcgcccaatctcagccttccatggcc
gtcttcaaccaggagaccctccagcagcgacttcaagccctaattgaaggcgcccgagag
agctggacctacgcaattttttggcagtccagcgttgatttctcgggtgcctctttgtta
ggatggggtgacggctactataaaggtgaggaagataaagggaagaggaagatgaccccg
tcgtctgtttccgagcaggaacaccggaagaaagtgctccgggagctgaattcgctcatt
tctgggacggtgtcgtcgtcggacgacgctgtcgatgaggaggtcaccgacaccgagtgg
ttcttccttgtatcgatgactcagtcgtttgtgaacggcgctgggttgccgggtcaggcg
ctcttcaactcgagtccggtgtgggttgtcggaaccgaacggctcatgagttctccttgc
gagagagcccggcaggcgcaggtgttcgggttacagactatggtttgtataccatcggct
aacggcgtcgtcgaactgggctccaccgaattgatttaccagagctcagatctgatgaac
aaggttagagttttgttcaatttcaataaccttgaagttggttcatggccgatcggagcc
gccgctcccgaccagggcgagagcgatccttcgtcgctctggatctccgatccgacctct
aatgtcgaaatcaaggattctgtgaatactacagctactggagcttccaatcccattggt
aatcagcagaattccaagtcaattcaatttgagaaccctagctcaagtagtttaactgaa
aaccctagtattatgcataatcctcagcagcaacagcagattcacacgcagggttttttc
actagggagttgaatttctcggaatttggatttgatggaaataatgggagaaatggtaac
ttgcattccctgaagcccgagtctggggaaattttgaattttggagacagtaagaggagt
tcttgtagtgcgaatgggaatatgttttcaggtcattcacaggtagttgcagaggaaaat
aagaagaggaggtcaccgacttcaagaggaagtgccgaagaaggcatgctttcgtttact
tcaggtgtgatattgccatcctcttgtgtggtgaagtcaagtggtggtggtggagattct
gatcactcggatcttgaagcttcagtggttcgagaggcagatagtagtagagtggtggaa
ccagaaaaaaggcctaggaagcgtgggagaaaaccggcaaatggaagggaagagccattg
aatcatgtggaggcagagcggcagaggagggagaagcttaaccagaggttttatgccctc
cgagctgtggttccaaatgtgtcaaagatggataaagcctcccttcttggtgatgcaatt
tcatatatcaatgagctcaggacaaagctacaaagtgcagagtcggacaaggaggacctt
cagaaggaagtgaattcaatgaagaaggagttggctagtaaagattcacagtactccggt
tcatctcgaccaccgccagaccaagatctcaagatgtcgaatcaccacggtagcaaattg
gtagaaatggatattgatgtgaagataatcgggtgggatgccatgattcgaattcagtgt
agtaaaaagaaccatcctgctgcaaagcttatgggggctctcaaggagctggacctagat
gtgaaccacgcgagtgtgtcggtggtgaatgatttgatgatccaacaggcaaccgtgaag
atgggaagtaggttttacactcaagatcagctgaggctagccctgtcatccaaatttgca
gacagcaggtag
DBGET
integrated database retrieval system
