Vitis riparia (riverbank grape): 117932231
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Entry
117932231 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117932231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117932231
03036 Chromosome and associated proteins [BR:
vri03036
]
117932231
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117932231
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
117932231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
RMC1_N
CFAP43_N
Tricorn_2nd
YajC
Motif
Other DBs
NCBI-GeneID:
117932231
NCBI-ProteinID:
XP_034709252
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All DBs
Position
15:14967710..14970363
Genome browser
AA seq
450 aa
AA seq
DB search
MDAGSLTSSNKYQSKCPDQRRTVRENLDRFIPNRSAMDFDYAHYMLTEGRKGKENPAASS
PSKEAYRKQMAETLNINRTRILAFKNKPPTPVELIPQEFYSASIPQQSKASKPRRHIPQT
SERTLDAPDLVDDYYLNLLDWGSSNVLAIALGGTVYLWDASDGSTSELVTLEDESGPVTS
VSWAPDGRHIAIGLNNSDVQLWDSTANRLLRTLKGGHASRVGSLAWNNHVLTTGGMDGKI
INNDVRVRSHIVETYRGHRQEVCGLKWSASGQQLASGGNDNLLYVWDRSSASSNSPTQWL
HRMEDHTAAVKALAWCPFQGNLLASGGGGGDRCIKFWNTHTGACLNSVDTGSQXCALLWN
KNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCTVASAAGDETLR
FWNVLGXPEVAAKPAPKAHPEPFAHLNRIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatctttgacctcttcgaacaaataccagtctaaatgcccggaccaaaga
aggactgtcagagaaaatttggacagattcatacccaaccggtcagcaatggacttcgat
tacgctcattacatgctaaccgaaggaagaaaaggtaaagagaacccagctgctagctct
ccatccaaggaggcttacaggaagcaaatggccgagaccttaaacatcaacaggacccgg
atccttgccttcaagaacaagccccctactccagtcgaattgattccacaggagttctac
tctgcaagtattcctcagcaatccaaagcctcaaagcctcgcagacatattcctcagact
tctgagagaacattggatgctcctgacctggtggatgactattacttgaacttactggac
tggggtagcagcaacgttctggctattgctcttggaggcactgtatatctatgggatgct
tcagatggttctacctcagaacttgttacgcttgaagacgaaagcggccctgtcacaagt
gtcagttgggctcctgatggaagacatattgccattggcttgaacaactctgatgttcag
ctatgggattcaacagccaaccgtctgctgagaactctgaaaggtggccacgcatcaagg
gtgggctccctagcttggaacaatcacgtccttacaactggaggaatggatggtaaaatc
ataaataacgatgtgagagtaagatcacatattgttgagacctacagaggacaccggcaa
gaagtatgcggactgaaatggtcggcctcggggcagcagctagccagtggaggcaatgac
aatttgctatacgtctgggacaggtcctcggcatcgtcaaattcgcctacacagtggctt
cacaggatggaagaccacacagctgcagtgaaagcacttgcatggtgtcccttccagggc
aatttgctggcctctggcggaggtggtggtgatcggtgcatcaagttctggaacactcac
acgggtgcctgcctgaactcggtggacactggctcacagntctgtgctctgctttggaac
aagaacgagcgtgagctccttagctctcacggttttacacagaatcaactcactctgtgg
aagtacccatcgatggtgaaaatggcagagcttactggtcatacatcccgagtccttttc
atggctcagagcccagatggctgcacagtggcatctgccgcaggagacgagacactgaga
ttttggaatgttttggganccccagaagtggcggctaagcctgccccaaaagcacaccct
gagccatttgctcatttgaaccggatccgttaa
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