Vitis riparia (riverbank grape): 117932300
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Entry
117932300 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117932300
03012 Translation factors [BR:
vri03012
]
117932300
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117932300
mRNA cycle factors
Stress granule specific factors
117932300
Translation factors [BR:
vri03012
]
Eukaryotic type
Initiation factors
eIF-4
117932300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
117932300
NCBI-ProteinID:
XP_034709374
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All DBs
Position
15:complement(10197713..10206926)
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AA seq
1125 aa
AA seq
DB search
MISNINVSSYDRDSYPSPGRIVDRQAGGSRPDRRGSSVVDDDKWSKLPGPFSSGRDLRPD
IGYGGDVVGFRSVQGGNYGVLRNPRGQSTMQYVGGILSGPMQSMGSQGGQRNSPDADRWQ
RATGFQKGLIPSPQTSVQMHRAEKKYEVGKATDEEEVKQRKLKAILNKPTPQNFEKLFEQ
VKAVNIDNAVTLTGVISQIFDKALMEPTFCEMYANFCFHLARELPDFSTDNEKITFKRLL
LNKCQEEFERGEREQEEANRADEEGEIKQSEEEREEKRIKARRRMLGNIRLIGELYKKRM
LTERIMHVCIKKLLGQYQNPDEEDVESLCLLMSTIGEMIDHPKAKEHMDVYFDRMAKLSN
NMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKNIEEVHRDAAQERQAQASRLSRGPSMN
SSTRRGAPPMDFGPRGSTMLSSPNSQMGGFRGLPSPQVRGFGAQDVRLEDRQRKLKAILN
KPTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFDKALMEPTFCEMYANLCFHLARELPDF
STDNEKITFKRLLLNKCQEEFERREREQEEANRADEEGEIKQSEEEREEKRIKARRRMLG
NIRLIGELYKKRMLAERIMHVCIKKLLGQYQNPDEEDVESLCLLMSTIGEMIDHPKAKEH
MDVYFDRMAKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKNIEEVHRDAAQERQ
AQASRLSRGPSMNSSTRRGAPPMDFGPRGSTMLSSPNSQMGGFRGLPSPQVRGFGAQDVR
LEDRQSYESRNPSVPLPHRAIGDDSITPGPQGGLARGMSSRGPPAMSSGPLGDISPGSGD
SRRLTAGLNGYSSVPDRTTYSSREEIMPRYIPERFGGPSAYYQSSTQDRNLQYGNRDVRT
PDRGFDRSLATSPPARAHGPAVSQNVPPEKVWPEERLRDMSIAAIKEFYSAKDENEVALC
IKDLNSPGFYPSMVSIWVTDSFERKDKEMDMLAKLLVNLTKSRDAMLSQVQLIKGFEAVL
TALEDAVNDAPKAAEFLGRIFAMVIIENVIPLRELGQIILEGGEEPGRLREIGLAAEVLG
STLEIIKSEKGENVLNEIRKVSNLRLDDFRPPDPSYRSAKLDKFI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaatattaatgtctcatcttatgatcgtgactcatacccaagtcctggaaga
attgtggataggcaggcagggggttctcgaccagatcgccgtgggagtagtgtggtggat
gatgacaaatggagtaaacttcctgggcctttctcttctggacgagatctgcgaccagat
attggttatgggggtgatgtggtaggctttcgatctgtccaaggaggaaactatggtgtg
ttaaggaacccacgtgggcagtcgactatgcagtatgttggaggaatcctctctggacca
atgcaatcaatgggttctcagggagggcaacggaatagtcctgatgctgatagatggcag
cgtgctactggcttccagaagggtttaattccttctcctcaaacttcggtacagatgcac
agagctgagaagaagtatgaagtgggtaaagcgacagatgaggaagaggtaaaacaaagg
aagttgaaagctatcctgaacaagccgactcctcagaactttgaaaagctttttgagcaa
gtaaaagcagttaatattgacaatgcagtcactctcactggtgtcatctcacagatcttt
gacaaagctttaatggaacctactttctgtgaaatgtatgctaacttctgttttcatttg
gcgagagagctgcccgacttcagtacagacaatgaaaagatcactttcaaaagattgcta
ctcaacaagtgtcaggaggaatttgagagaggggaaagagaacaagaagaagctaataga
gctgatgaggagggggagattaaacagtctgaagaggaaagggaggagaagagaatcaaa
gcacgaagaaggatgttgggcaacattagattgattggggaattgtacaagaagaggatg
ttgaccgagaggataatgcatgtgtgcatcaagaagttgttagggcagtatcagaatcct
gatgaggaagatgtagaatccttgtgcctactgatgagcacaattggagagatgattgat
catcccaaagccaaggagcatatggatgtatactttgataggatggcgaagttatcgaac
aacatgaagctatcttctagggtaaggttcatgttgaaggatgcaattgatttgcgaaag
aataaatggcaacaaagaagaaaagttgaagggccgaagaatattgaggaagtgcacagg
gatgcagctcaagaaagacaggctcaagctagtaggctatctcgtggtccaagcatgaat
tcatcgacaagaaggggggcccctcctatggactttggtccaagaggttcaactatgtta
tcatctccaaattcccaaatgggtggtttccggggtttgccatctcctcaggttcgtggg
tttggtgctcaggatgttcgattagaggatagacaaaggaagttgaaagctatcctgaac
aagccgactcctcagaactttgaaaagctttttgagcaagtaaaagcagttaatattgac
aatgcagtcactctcactggtgtcatctcacagatctttgacaaagctttaatggaacct
actttctgtgaaatgtatgctaacttatgttttcatctggcgagagagctgcccgacttc
agtacagacaatgaaaagatcactttcaaaagattgctactcaacaagtgtcaggaggaa
tttgagagaagggaaagagaacaagaagaagctaatagagctgatgaggagggggagatt
aaacagtctgaagaggaaagggaggagaagagaatcaaagcacgaagaaggatgttgggc
aacattagattgattggggaattgtacaagaagaggatgttggccgagaggataatgcat
gtgtgcatcaagaagttgttagggcagtatcagaatcctgatgaggaagatgtagaatcc
ttgtgcctactgatgagcacaattggagagatgattgatcatcccaaagccaaggagcat
atggatgtatactttgataggatggcgaagttatcgaacaacatgaaactatcttctagg
gtaaggttcatgttgaaggatgcaattgatttgcgaaagaataaatggcaacaaagaaga
aaagttgaagggccgaagaatattgaggaagtgcacagggatgcagctcaagaaagacag
gctcaagctagtaggctatctcgtggtccaagcatgaattcatcgacaagaaggggggcc
cctcctatggactttggtccaagaggttcaactatgttatcatctccaaattcccaaatg
ggtggtttccggggtttgccatctcctcaggttcgtgggtttggtgctcaggatgttcga
ttagaggatagacaatcttatgaaagcaggaatccatcagttccattgccgcatagagcc
attggtgatgattctattactcctggtcctcaaggtggtcttgctaggggaatgtccagt
agagggccaccagctatgtctagtggtcctttgggtgatatttctcctggttcaggagac
tctagaaggttgacagcaggtttgaatggttatagttctgtaccggataggacaacttac
agttcaagagaggaaatcatgccaaggtacatcccagagagatttggtggtccatctgcc
tattaccagtcaagtacacaagaccgaaatctgcagtatggaaacagggatgtaagaacc
ccagatcgtggctttgatcgatctcttgccacctctccacctgcacgggcacacggacca
gctgtctcacaaaatgttcctccagagaaggtatggcccgaggaacgtttacgtgacatg
tccatagcagcaattaaagaattttacagtgccaaagatgagaatgaagttgctttgtgc
atcaaagatctaaattccccaggcttctacccatctatggtgtctatttgggttacagac
tcttttgagaggaaagacaaagaaatggatatgctggctaagcttcttgtcaatctaaca
aaatctcgggatgccatgttaagtcaagttcaactaatcaaaggatttgaagctgtactg
actgctttggaggatgctgtaaatgatgccccaaaagcagcagaatttcttggtcgcatc
tttgccatggttatcatagagaatgtgattcccttaagggagttagggcagataatactt
gaaggtggagaagagcctggtcggctgcgagaaatcgggcttgcggctgaagttctgggg
agcacattggagattatcaaatcagagaaaggggagaatgtgttgaatgagattcgcaaa
gtgtccaatttgcggttggatgacttccggcctcctgatccttcttacagatcagcaaaa
ttagataaatttatttag
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