Vitis riparia (riverbank grape): 117932306
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Entry
117932306 CDS
T07274
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117932306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117932306
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
SR proteins
117932306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DbpA
SET_assoc
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117932306
NCBI-ProteinID:
XP_034709385
LinkDB
All DBs
Position
15:complement(4688676..4694370)
Genome browser
AA seq
252 aa
AA seq
DB search
MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTVF
GRKGRQLRVEWTKQERGIRRPGGARKSSANMKPSKTLFVINFDPIHTRTRDLERHFDLYG
KILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVISVEYAARDDDDDRRNGYSPER
RGRDMSPDRRSHDRGRSPSPYHRDRASPDYGHGANANSRSEQRGSPNYDRDESPVNERYH
SRSPPPRERSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatcttttgtggcaaccttgagtatgatgcacgtcagtctgatgttgagcga
ctgttcagaagatatgggaaggttgatagggtggatctgaagtccggatttgcttttgtt
tatatggatgatgaacgggatgcagaggatgcaattcgaagacttgacaggacagtattt
ggcagaaaggggcgtcaacttcgtgttgaatggacaaagcaagaacgagggattagaagg
cctggtggtgcaagaaaatcttcagctaatatgaaaccctcaaaaaccttgtttgtgatt
aattttgatccaattcatactcggaccagggatctggagaggcactttgacctatatggg
aaaatattgaacataaggatcagaaggaattttgcattcattcagtttgaatcacaggag
gatgccaccaaagcattggatgcaacaaacatgagcaagttcatggatcgggttatttca
gtagaatatgcggctcgagatgatgatgatgatagaagaaatgggtatagccctgaaaga
agaggacgtgacatgtctcctgataggagaagtcatgatcgagggcgatccccaagtcca
taccatagggatagggctagcccagactatgggcatggagcaaacgcaaattccaggtct
gaacagcgaggaagccctaactatgacagagatgaaagcccagtcaatgagagataccac
agccgatcacccccaccacgtgaaagatcccgatcttga
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