Vitis riparia (riverbank grape): 117932315
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Entry
117932315 CDS
T07274
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117932315
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117932315
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117932315
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117932315
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117932315
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117932315
Prokaryotic type
Other AARSs
117932315
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Membralin
Motif
Other DBs
NCBI-GeneID:
117932315
NCBI-ProteinID:
XP_034709397
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Position
15:20732915..20750698
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AA seq
620 aa
AA seq
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MEGAAEEAAKAILDLSVDGSSSETTSKNARKKELKMKQREEEKKRKEEEKAKQAAAVSSS
KVQKPMAADDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIKKYGALSNG
DHLEDVTVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVK
RGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGS
TRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMM
NMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTH
NPEFTTCEFYMAFADYNDVMELTEQMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPF
RRIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDKLVGHFLE
ETCVNPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA
EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM
KPQDEPSSVQPPAEPSTQAV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgctgctgaagaagctgccaaagcaatcttggatttatccgtggatggttct
tcatctgaaaccacaagcaaaaatgctcggaagaaggagttgaagatgaagcagagggag
gaggaaaagaagcgcaaagaggaggaaaaagcaaagcaggctgctgcagtctcaagctcg
aaggttcagaaacccatggctgctgatgatgaagatatggatccaactcaatactttgaa
aatagggtgaaatatcttgcagctcaaaaggctgctgggaaaaatccatatcctcacaaa
ttctttgttacactatctatccttgaatacataaagaaatatggagccttaagcaatggg
gatcaccttgaggatgtcacagtatcattggctgggcgaataatgagcaaacggtcgtcc
tcttcaaagctatttttttatgatttgcatggtgatggtgctaaagttcaagttatggct
gatgcaaggagctcagatatggatgaggctgaattttctaggttccattctggtgtgaag
cggggtgatattgttggtgtcactggctttccaggaaaaaccaaaaggggggagctaagt
atttttccaaaatctttcatcgtgttatctcattgtctccatatgatgccaagacagaaa
gctggtcctggttctgataatgccaatgtgaagaaaactgatgtatgggtcccaggaagt
accaggaatcctgaaacatatattttgaaagatcaggaaactcgatatcgtcaacgttac
ctggatttgatgttgaatatggaggttcgacaaatattcaagacccgagctaagattatt
tcatacattagaagctttcttgacaatcttgatttcttggaggttgaaactccaatgatg
aacatgattgctggaggagcagcggctcgtccatttgtgactcatcacaatgacctaaac
atgaagttatatatgcgtatcgctcctgaactctatcttaaggagctagttgttggtgga
ttagaccgtgtttatgaaatcggaaaacaatttaggaatgagggaattgatttgacccat
aatcctgaattcactacatgtgagttttatatggcctttgcagactacaatgacgtgatg
gagctcactgagcaaatgttgagtggcatggtcaaggaacttacaggtggctacaaaatt
aaatatcatgcaaatggcttggataaggacccaattgagattgactttactccacctttc
agaaggattgacatgatagaggatttagagaagatggcagacctcagcatacccaaggat
ctctcaagcgatgaagcaaacaaatatttggtggatgcatgcttgaaatttgatatcaaa
tgcccccctcctcaaacaactgctcgtttgttggacaaacttgtggggcattttcttgag
gagacatgtgtaaatcctactttcatcactaaccatcctgaaataatgagtcctttggca
aagtggcacagatcgaaacaaagcttgactgaacgttttgaattgtttgtcaacaagcat
gaactttgcaatgcttacactgaattgaatgatcctgtggtccaacgtcagcgatttgcc
gaacaactcaaggaccgacaatcaggtgatgatgaagcaatggctttggatgaaacattt
tgtatggctcttgagtatggattaccacccactggtggctggggattgggaattgatcga
cttacaatgatgttaacagattcacaaaatattaaggaagttcttctctttccagccatg
aaacctcaagatgagccttcttctgtccagcctcctgctgaaccttctacccaagctgtc
tag
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