Vitis riparia (riverbank grape): 117932584
Help
Entry
117932584 CDS
T07274
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117932584
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117932584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
TFIIB
A2L_zn_ribbon
GDH_C
Trm112p
AKAP28
Motif
Other DBs
NCBI-GeneID:
117932584
NCBI-ProteinID:
XP_034709751
LinkDB
All DBs
Position
15:complement(1586041..1587648)
Genome browser
AA seq
535 aa
AA seq
DB search
MEASGSCKGCKKNSLIRDDVTGSLVCSSCGLIQPFDNYDPQLGGLNGPQGTFVRVGTAGT
GSSLNYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRIMVSTITEGEFGQGDWFPVLVGAC
SYVVRRRSNRALPIAEVGAVIGCDVYELGRMIGRVVEFLNLKLPELDIVNSFELAFRKCG
SLNRVSKDKVDQMLKQGKFLVQWAVKWFLTTGRRPLPMIAAVLMFVAELNQVDIRIENIA
NEIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSSKNIVKNAPFVIQYMEMKLRSQLSG
KPRKGKKNLERIGFDLDSVVSECLKKEFDYVSEGYSIDKGAAADDRNGLLLDIDDSDKLK
LSQESLSLMYSKFVNEGSRVNPMGDDGGDNRRRKRRREYDPPVIKNWWNGKSEKGKKLLL
KQILEKDVGLNALPPSFVSGCLAYERRREKINAAKLRIKKVMYPSNTSSDDTDDFSAKEQ
EHLHAEKKRRRAKVDIDWEDFAIETLLLHHVKEDEIEKGHYNTLLDLHVFNSGNL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctcaggctcctgcaaaggttgtaaaaagaattctttgattcgggacgatgta
acgggctcattggtgtgttcatcctgcggcctcatccaacctttcgacaactacgatccc
caattgggtggcctcaatggtccacagggcacattcgtccgcgtcggcaccgccggaacc
ggaagctccttgaactacaaggacaagaaaatcttcgaagcccagaaactcatcgatgac
ttgatgttcaagttagggttttcgagtgagaagtcgaatgaggtcaggataatggtttcc
accattacagaaggagagttcggtcaaggcgattggttccctgtcctcgttggcgcttgt
tcgtatgttgtaaggcggcggagcaatcgagcactgccgattgccgaagtgggggcggtg
attggttgcgatgtttatgagctagggcgaatgatcggccgcgttgttgaatttttgaat
ctgaaattgccggagcttgacattgtgaattccttcgaattagcgtttcgaaaatgtggg
agtttgaatagggtttccaaggataaggtggatcaaatgcttaaacaaggcaaatttttg
gtgcaatgggcagtgaaatggtttttgacgacggggcggaggccactgccgatgattgca
gctgtgttaatgtttgttgcagaattgaatcaagtggatattcggatcgagaatattgca
aatgaaattcatgccggagtggccacgagtaggttaaggtataaagagctttcagaggct
cttgtgaaagtagcccaatcattgccatgggggagtgatgtttcctctaaaaatatagtc
aagaatgcaccttttgtgattcaatatatggagatgaagttgaggtcacaattatccgga
aaacccagaaaagggaagaagaatttggagaggattggttttgatttggacagtgttgtt
agtgaatgtttgaagaaagaatttgactatgtatccgaaggttatagcattgacaagggt
gctgcagcagatgatagaaatgggttattgttagacattgatgactccgataagctcaag
ctttcgcaagaatccttgtctttgatgtactctaagtttgtgaatgagggttctcgggtt
aaccctatgggagatgatggaggggataacagaagaagaaaaaggcggagagagtatgat
cctcctgtaattaagaattggtggaatggaaaatcggaaaagggtaaaaagcttttgctt
aagcagatactggagaaagatgtaggattgaatgctttgcctccatcttttgtttccgga
tgcttagcctatgaacggagaagggaaaaaataaatgctgctaagctgcgcatcaagaag
gttatgtatccatcaaatactagttcagatgacacagatgatttttcggccaaggaacag
gaacatttacatgcggagaagaaacgaaggagagcaaaagttgatattgattgggaagat
tttgccattgaaaccctcctccttcatcatgttaaagaagatgaaattgagaaggggcac
tacaataccttattggatcttcatgttttcaactcagggaatttgtga
DBGET
integrated database retrieval system
