Vitis riparia (riverbank grape): 117932685
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Entry
117932685 CDS
T07274
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117932685
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117932685
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
RtcR
Motif
Other DBs
NCBI-GeneID:
117932685
NCBI-ProteinID:
XP_034709851
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Position
15:5623247..5629587
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AA seq
668 aa
AA seq
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MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI
NLFSKFGAFPVFVVDGTASPLKSQARIARFFRGSGIDLSGLPVVEEGVSVERNAEFSRRV
QECVELLELLGIPVLKAREEAEALCAQLNSEGHVDACITADSDAFLFGAKCVIKCLRPNC
KEPLECYHMSDIEAGLGLKRKHLIAISLLVGNDYDLNGVQGIGLDTAVRFVQGFSEDEIL
NRLHEKGNGATMFDGAVKSMDDSIPCLDERSPRPKVPHCSTFPMKGCLEKPEGFACDCSI
SDVDHKEKEQKKQEMDDSIPSLDERSPRPKVPHCSICGHPGRKKSHLKFSCDFCGTFPRK
GCLEKPEGFVCDCSTCDMDRKEKAQKKQENWRLRVCKKIAMEQNFPNNEIIELYLSNNHG
HFTENDGPHISWESPKTEVLVDFLAYHQHWEPSYIRQRMLPMLSTIFFREKALNPTNTLL
YGQYEFDSIQRVKVRFGHQFFVVKWKKAVHAMASVTYTIPGDSDIEQVKLTEVDESIDLL
DECNVPQIHVDDGCWFLLTDENMDLVRAAFPEEVNRFLLEKELKESKRRNKSGLRSEGVE
EMPDSPKSKGVQLSITEFYRSAKVIFHEKPGEDSAGNSDAQGRETSTEKRKASDSKLSKS
VRRRLLFG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgggagggagtttttgggaattactgaaaccctatgcccgacccgaaggcttc
gattacatccgaaacaaacgggtggctgtggatctctctttctggatagtccaacaagaa
accgccactaaagccaatgttcggaaccctcacctcagactcactttcttccgtacgata
aatctcttctctaagtttggcgcgtttccggtgtttgttgtggatggaactgcgtcgccc
ttgaaatctcaggcaaggattgcacggttcttccgtggttctggaattgatttgtcgggt
ttgccggtggttgaggagggtgtttcggtggaaaggaatgccgaattctcaagacgcgtt
caagagtgtgttgaactgcttgaacttcttggtattcctgtactgaaagcaagagaagag
gctgaagctctttgtgcccagttaaatagtgaaggccatgtagatgcttgcatcacagct
gacagtgatgcattcctctttggggctaaatgtgtgataaaatgcctccgacccaattgc
aaggaacccttggaatgctaccacatgtcagatattgaagctggtcttggcctgaagagg
aaacacttgatagccatctctcttttggttggcaatgactatgatttaaatggggtacaa
gggattgggcttgacactgctgttcgttttgtccaaggctttagtgaagatgagattctg
aataggttacatgaaaaaggcaatggggcaactatgtttgatggggctgttaaatctatg
gatgattctattccctgtttggatgagagatcaccaaggccaaaagttcctcattgttcc
acctttcctatgaagggctgcttggaaaaaccagaggggtttgcatgtgattgctccatc
tctgacgtggaccataaggaaaaggaacaaaagaagcaagagatggatgattccataccc
agtttagatgagaggtcaccaaggccaaaagttcctcattgttccatctgtgggcatcca
ggtcgcaagaaatctcatctcaagttttcttgtgatttttgtggcacctttcctaggaag
ggctgcttggaaaaaccagaggggtttgtatgtgattgctccacctgtgacatggatcga
aaagaaaaggcacagaagaagcaagaaaattggcggttaagggtttgcaaaaagattgcc
atggagcagaatttcccaaataatgagattattgaattgtatttgagcaataaccatggg
cattttactgaaaatgatggacctcatatatcatgggaaagcccaaaaacagaggtgctt
gttgatttcttagcttatcatcagcattgggagccgtcttatattcgtcaaaggatgctt
cctatgttgtctaccatcttcttccgagaaaaggctttgaatccaacgaatacgttgcta
tatgggcagtatgagtttgattctattcagcgtgtgaaggtaaggtttgggcatcaattt
tttgtggtcaaatggaagaaggctgtacatgcaatggctagtgttacctatacaatccct
ggtgactctgatatagagcaagtgaagctaacagaagttgatgaatccattgatctattg
gatgagtgcaatgttcctcagattcatgttgatgatgggtgctggtttttgttgaccgat
gagaatatggacttagttcgggctgcttttccagaggaagttaacagatttctgctggaa
aaggaactgaaagaatcaaaaagaagaaataagtctggtttaagatctgaaggggtggaa
gaaatgccagattcgccaaaatcaaaaggagtccagctaagtattactgaattttaccgt
tcagcaaaagtaatttttcatgaaaaaccaggagaagattcagctgggaattcagatgcc
cagggtagagagacctcaactgaaaagagaaaagcctcggattcaaagctttccaagtct
gttagacgacgccttttgtttggttag
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