Vitis riparia (riverbank grape): 117932691
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Entry
117932691 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117932691
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117932691
Ion channels [BR:
vri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117932691
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117932691
NCBI-ProteinID:
XP_034709866
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Position
15:2984375..2991890
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AA seq
654 aa
AA seq
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MNFELVNPGSRKKILDPEGSFLQTWNKIFLVSCVLAISLDAFFFYAPVINRHSTCLDLDD
RLQIVACVLRTLIDVFYILHIIFQFRTGFVGPSSRVFGDGVLIDDSSVIAKRYLPYFVID
ILSILPLPQVAVFIVNPQLKSPVSFIRKDFLKFVIFSQLVPRLVRIYPLYKEVTTTSGML
IETAWAGAAINLFFYMLASHVVGAFWYLLSIERQDQCWRNWCGAHNVSYSYLYCGGDRIH
NDLAEQYALLNASCPLSEPDGIENSTVFNFGIFIKALQSRVVETRDFPYKFSYCFWWGLR
NISSLGSNLDTSPFIGEVLFAVFISIFGLILFSLLVGNMQKYLQNLQSIAARIEEEREKR
KNTELWMSHRILPEGLRIRIRQYRQYKWKKTKGVDENGIINDLPKDLRRDIKRHLRLALL
MRMPVFESFDELLLDAICDRLKPVLYTEGSYIVREGDPIDEMLFIGRGKLTSISTNGGIG
FFNLGYLKAGDFCGEELLPWALASQSSSFHPISARTVSAITEVEASALTVHDLKSVISSH
FLYPLHRKKVLQSIRFYSQGWRTWAACFIQAAWWRYQKRKQNKALRRQEAEDRLRDALSK
AVGTSTTLGATNYASRFAANMLRILRHNGGSRARLPQRSWFPLSPKPRDPQLTI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgagctggttaatccagggtccaggaagaaaattcttgatccagagggatca
tttcttcagacatggaataaaatatttctagtctcttgtgtgcttgcaatttccctcgat
gcatttttcttttatgcccctgttattaatcgtcatagtacgtgcctagatttggatgac
cgattgcagattgttgcttgtgttcttcgtacactcatcgacgtcttctacatccttcat
attatctttcagttccgcactggttttgttggcccttcttctcgagtatttggagatggt
gtattaattgatgattcttcagttatagcgaaaagatacttgccctacttcgtcatcgac
attctatcaattttacccctcccacaggtagcagtttttattgtcaacccacaattgaaa
agtccagtttcattcattaggaaggacttcttgaagtttgttattttctcccaattagtg
ccaagacttgtgcggatctatccactatataaagaagtaactacaacttctggcatgctt
attgaaacggcatgggctggtgctgctatcaatctcttcttctatatgctagccagtcat
gtggtcggagccttttggtacttgctgtctatagagaggcaagatcagtgttggcgtaat
tggtgtggggcacataatgtgagttattcatatttatattgtggaggagaccgaatacac
aatgaccttgctgagcaatatgcattactaaatgcttcttgccctcttagtgaaccagat
ggaattgaaaattccacagtttttaactttggaatattcattaaggctcttcagtctcgg
gttgtggaaacaagagattttccatataagttttcttattgcttttggtggggtctgcga
aatattagttctctgggttcaaaccttgatacaagccctttcattggagaggttctgttt
gctgtctttatttccatatttggattgatattattttcattacttgttggcaatatgcag
aaatatctgcaaaatctacaatccatagctgctagaattgaagaggaaagagagaaaagg
aaaaacactgagctgtggatgtcccaccgcatacttcctgagggcctgaggattcggatt
aggcagtatagacagtacaaatggaaaaaaaccaagggtgttgatgaaaatgggattatc
aatgaccttccgaaggacctccgaagagacataaagcggcatctccgtttggctctactt
atgagaatgccagtgtttgaaagctttgatgagctactgttggatgcaatttgtgatcgc
ctcaagccagttctttatacagaaggtagctacattgtccgtgagggggatccaattgat
gaaatgctctttatcgggcgaggcaaactaacaagcataagcacaaatggtggaattggc
ttcttcaacttaggttatctcaaggctggtgatttctgtggagaagagcttcttccatgg
gccttggcgtcccagtcctcttcatttcaccccatctcagccagaaccgtaagtgccata
acagaggttgaagcctctgctctaacggttcatgacttgaagtctgtgatctcctcccac
ttcttgtatcctcttcacagaaagaaggttctgcagagtatcaggttttactcacagggg
tggaggacatgggctgcctgttttatacaagcagcttggtggcgttaccagaagaggaag
caaaataaggccttaaggaggcaggaggcagaagacaggttgcgagatgctttgtcgaaa
gcagtaggaacctctacaaccttgggcgccactaattatgcatcgaggtttgctgccaat
atgctacgaatcttgaggcacaatggtggtagcagagccagattgccacaaagatcatgg
ttcccgctgtctcctaagccacgtgatccccagcttaccatctga
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