Vitis riparia (riverbank grape): 117932888
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Entry
117932888 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease GEN-like 2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117932888
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117932888
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Chromo_2
Chromo
Chromo_shadow
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
117932888
NCBI-ProteinID:
XP_034710088
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All DBs
Position
16:17528694..17536601
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AA seq
565 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLYHLQNKRVCIDLSCWIVQLQNVNKSHASIKDKLYLKGLFHR
LRALIALNCSLIFVTDGSIPAIKLATYRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSC
MIKEAKVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL
GEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVV
LKKIALEGISFAKKSKGSRKQGQVLKCNDKENCSDHEMNINGSEHSSQREFLRVIDAYLK
PKCHSADSDAVHRALALLPFQRTEAQKICAQLFEWPPEKTDEYILPKIAERDLRRFANLR
STSSNLGIHFPLHEIPVKCPISGIIKHRKVQGRECFEVSWKXFDGLKSSIIPAELVKSAC
PEKIVEFEGRKPQEKKQNHRKPRPKKSNNRAPLAEIDKQLQNLLLDIEAGGNSFQNVSFS
SSMTTSKTQTDATKAAKTQYMLLDTESESDNDNHNEAIICHQNGQCGSEIVIDLLSPSPP
IRARKVSKCQQGNNGQQIDVIDLSD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaaaaacctctgggacatcttggaatcttgcaagaaaactctcccactttac
cacctccagaacaagagggtgtgcatcgatctttcatgttggatagttcaacttcaaaat
gtaaacaaatctcatgcttcaatcaaggacaagctttatctcaaaggcctctttcaccgt
cttagagctctcattgctttgaattgtagccttatttttgtcacagatggatcaatccct
gcaatcaaactagccacttacagacggcgcttaaattcaggaactgaggtcactcgagat
gaaacaaattcccataatgtgccttcgctccggagaaatatgggatctgaattctcatgc
atgataaaggaggcaaaagtccttggcttggcacttggtatcccttgcttagatgggatt
gaagaagctgaagcacagtgtgcattgttaaactcagaatcattatgtgatggatgtttc
acttcagattcagatgttttcctttttggtgcaaggacagtgtacagagacatttgcctt
ggggaaggcggctatgttgtttgttatgaaatggcagacatagagagcacacttgggttt
ggaaggaactccttgattactctggcacttcttcttggtagtgattactctcagggagtt
catgggtttgggccagagtcagcatgccagattgttaaatcagttggtgaagaagttgtt
cttaaaaaaattgcattagaagggatatcctttgcaaagaaatcaaagggttcaaggaaa
caggggcaagttcttaagtgcaatgacaaagagaattgttcagaccatgaaatgaacatt
aatggatctgagcatagttcacaaagggagttcttgcgagtaattgatgcttatttgaaa
ccaaaatgtcactctgcagactctgatgcagtgcatagggctcttgctcttcttccattt
caacgcactgaagctcagaagatatgtgctcagttgtttgagtggcctcctgagaaaaca
gatgagtatatccttcctaagatcgctgaaagagacttgcggcgatttgccaatttgcgt
tcaacttcttcaaacttgggaattcattttccgttgcacgagataccagtaaaatgccct
atttctggaattataaagcacagaaaagtccaaggaagagaatgctttgaggtttcctgg
aagnagtttgatggccttaaatcctccataataccagcagagcttgtgaagagtgcttgt
cctgaaaagattgtggagtttgaagggagaaaaccccaagagaagaaacaaaatcatcgt
aaaccaaggccaaagaaatccaataacagagctcccttggctgagattgataaacaactc
caaaatctattgcttgacatagaagcaggaggcaattcttttcaaaatgtttcattttct
tcaagcatgacaacatccaaaacccaaactgatgcaaccaaagcagcaaaaacacaatat
atgttgcttgatacagagtcagagagcgacaatgacaatcacaatgaagccataatttgc
catcagaatggtcaatgtggctctgaaatagtcattgatctgctaagcccttccccacca
atacgtgcccgaaaggtttcgaagtgccaacaaggcaataatggccaacaaattgatgta
attgatttgagtgattga
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