Vitis riparia (riverbank grape): 117933023
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Entry
117933023 CDS
T07274
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117933023
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117933023
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117933023
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117933023
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117933023
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117933023
Prokaryotic type
117933023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
117933023
NCBI-ProteinID:
XP_034710260
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Position
16:16355498..16390769
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AA seq
1062 aa
AA seq
DB search
MDSQVETEAKPDIEDPEKKKKKEEKAKAKELKKLKALQKAEAAKLQAQQASSNASKKSER
KIKRDAEEENTEDYIHPETPFGEKKRLSRQMAKQYSPSAVENSWYEWWEKSGFFVADSSS
SKPPFVIVLPPPNVTGALHIGHALTSAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVV
EKKLMRERKLTRHDIGRENFVSEVWNWKNEYGGTILKQQRRMGASLDWSRECFTMDEKRS
LAVTEAFVRLYKEGLIYRDLRLVNWDCILRTAISDIEVDYEDIKVRTLLKVPGYEKPVEF
GVLTSFAYPIEGGEEIVVATTRVETMLGDTAIAVHPDDERYTRFHGKFAIHPFNGRKLPI
ICDAILVDKNFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINSNGGPEFAGMPR
FKAREAVVAALHKKGLYKGAKDNEMRLGLCSRTKDVVEPLIKPQWYVSCSGIANEALDAV
MDDENRKIEIIPKQYAADWKRWLENIRDWCVSRQLWWGHRIPAWYVTLEDDKMKELGAYT
DHWVVARNEEEAQIEASRMFPGKNFQISQDPDVLDTWFSAGLFPLTVLGWPDDTQDLKAF
YPTSVLETGHDILFFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDP
LEVINGISLEGLHRRLEEGNLDPSELVIAREGQVKDFPNGIAECGADALRFALVTYTAQS
DRINLDIQRVVGYRQWCNKLWNAIRFAMSKLGDDYTPPMEIVPDVMPFTCQWILSVLNKA
ISKTVSSLDSYEFADAASTVYSWWQFQLCDVFIEVVKPFFSSNDPKFASARRFAQDTLWV
CLDNGLRLLHPFMPFVTEELWQRLPPARDCARKESIVISDYPSVVQHWTNERVEYEMDLV
ESTVKSLRSLRSLMPAKERHERRPAYVLCRTDAIAEIINSYELEILTLATLSSLKVLNEG
DDAPIGCAVSVVNESLSVYLKLQGALNAEAEREKLRKKMEEIRKQQEHLTQIMSASGYQE
KVPARIHEENVAKLSSLMQELLSFEQASQHLERDIAAEQESH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcaggtggagacagaggcaaagccagatattgaggaccctgagaagaagaaa
aagaaagaggaaaaggcaaaagcaaaggaattgaaaaaactcaaggctttacaaaaggcg
gaggcagccaaacttcaggcacaacaagcatcgtcaaatgcctcaaaaaaaagtgagagg
aaaataaagcgggatgctgaggaagagaatactgaggattatattcacccagaaacacct
tttggtgagaagaaacgtctttctcgtcagatggcaaagcaatatagtccaagtgcagta
gagaattcatggtatgaatggtgggaaaaatcaggcttctttgtggcagattctagcagc
tccaaaccgccatttgtgattgttctgccacctccaaatgtaactggggccctgcatata
ggtcacgcccttacctctgccatacaggatacaattatccgttggcggagaatgtcggga
tacaatgccttatgggttcctggaatggaccatgctgggatagcaactcaggtcgttgtg
gagaagaagttaatgcgggaaaggaaattaaccagacatgatattggccgtgagaacttt
gtatctgaagtttggaattggaagaatgagtatggggggaccatattgaaacaacaacga
cgtatgggtgcttctcttgattggtcccgtgagtgttttacaatggatgagaaaaggtca
ttggctgttacagaggcttttgttaggctttacaaggagggtcttatctatagggatctt
cgattagtgaattgggattgcatcttgcgaacagcaatatctgatattgaggtagactat
gaggacatcaaagttaggactctcttaaaggttcctggatatgaaaagccagtggagttt
ggtgttttaacatcgtttgcttatcctatagaaggaggggaagagatagttgtggccact
actagagtggaaacaatgcttggtgatactgctattgctgtacatcctgatgatgaaagg
tacacgcgttttcatggaaaattcgccattcatccatttaatggaaggaaacttcctatt
atttgtgatgcaatactcgttgataagaattttgggactggtgctgttaagataactcca
gcccatgatccaaatgattttgaggttgggaagcgtcataatcttgagttcatcaacatt
ttcactgatgatgggaaaataaatagcaatggtggtccagaatttgcagggatgccacgt
ttcaaagcccgtgaggctgtggttgcagcattacacaaaaagggactctataaaggcgca
aaagataatgagatgcgtctaggcctttgttcaaggaccaaggatgttgtggagccactg
ataaagcctcagtggtatgttagttgcagtggaattgccaatgaagctcttgatgctgtt
atggatgatgagaataggaaaattgagattattccaaagcagtatgctgctgactggaaa
agatggcttgagaacattcgagattggtgtgtctcaaggcaactttggtggggccaccgc
attcctgcatggtatgttacattggaggatgacaaaatgaaggaacttggtgcatacact
gaccactgggtggttgctagaaatgaggaagaggctcaaattgaggctagcagaatgttt
cctgggaagaactttcagatatctcaagatcctgatgtactggacacatggttttctgct
ggtctcttcccattaactgtgttgggctggccagatgatacacaagatttgaaggcattt
tatccaacttcagttctggaaactgggcatgacattctctttttctgggttgctcggatg
gtgatgttaggtattaagctgggaggtgatgtgccttttagaaaggtttatttgcatcca
atgattcgtgatgcacatgggcgtaagatgtctaagtcgttgggaaatgttattgaccct
cttgaagtgataaatgggatatcccttgaaggccttcacaggaggttggaagagggtaac
ttggatcccagtgaactggtaattgccagagagggacaggtgaaggacttccctaatggt
attgctgaatgtggtgcagatgctcttcgttttgctcttgtgacttatacagcacagtct
gatagaataaatttggatatccaaagagttgttgggtatcgccaatggtgtaataaactg
tggaatgcaatacgatttgctatgagcaagcttggagatgattacaccccaccgatggaa
atagttccagatgttatgccatttacctgccaatggatactttctgtactgaacaaggct
atatcaaaaacagtgtcatcattggattcatatgaatttgcggatgctgccagcacagta
tattcatggtggcagttccaattgtgtgatgtattcattgaagtagttaaacctttcttc
tctagtaatgatcctaaatttgcatctgcgaggaggtttgcccaagatacactgtgggta
tgtttggacaatgggctgcggttgcttcatccatttatgccatttgttacagaagaattg
tggcagcgccttcctccagcaagagattgtgctaggaaagaatcaattgtgatatccgac
tacccatcagttgtacagcattggacaaatgaaagagtagagtatgagatggacctcgtg
gagtctactgtgaaatcacttaggtctctcaggtctttgatgcctgctaaggaacgacat
gaaaggcgaccagcttatgtgctttgccggacggatgcaattgcagaaattataaatagc
tacgaactggagattttgactcttgccactttatcatccttgaaggttcttaacgagggt
gatgatgctcctatcggatgtgctgtatcagtagtaaatgagagcctttctgtctatctc
aagcttcagggagctcttaacgcagaagcagagcgagaaaaactcaggaaaaagatggag
gagataagaaagcaacaggagcatctaacacaaatcatgagtgcttctgggtaccaagaa
aaggttccggctcgtattcatgaagaaaatgtagccaagttatcatcattgatgcaagaa
cttttgtcgtttgaacaagctagccagcatctggaacgtgatattgcagcagaacaagaa
tcccattga
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