Vitis riparia (riverbank grape): 117933034
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Entry
117933034 CDS
T07274
Name
(RefSeq) COP1-interactive protein 1
Organism
vri
Vitis riparia (riverbank grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIP1
ATG16
Crescentin
Filament
DUF5799
Leu_zip
HAP1_N
Uso1_p115_C
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117933034
NCBI-ProteinID:
XP_034710275
LinkDB
All DBs
Position
2:complement(18622991..18632705)
Genome browser
AA seq
1830 aa
AA seq
DB search
MRKHQWRESIKSFFGNHIDPVKDEQLKGNKTEIDDKVKTLLELIKEEGLDEKDGNGDGNL
KRQPLIELIEDFHRNYQSLYDRYDNLTEILRKKIHGKPEKDTSSTTSSDSDSDHSTKERS
DKNGKALSKNPETEEIIMHWKSEVERLDGEKTELLVENGNLKQKLDNASNVEAELNQRLE
DLNRERENLIMEKETAIKRIEVGEEIAEELKSTGDKLKDEKLVLEQELEAAKGEISNLEQ
LLESTRQEMSSLSHTHRAIEEEKDSLALKILEISNEFKQAENAMQELMAESSQLKVKLGD
KESELSNLMKKHEGHENEASARIKGLEAQVTGLELELSSLSTQRGEMEKLIESTATEAKQ
LAEENLGLKAQISQLETISKEREEELAGLLKKFKDDENESLSKIADLTAQINNLQLEVDS
LQAQKDELEKQVVQNSEEASVQVKGLTEQVTELKLELESLHSLKMEMELMLEKKTEENSE
YLIQMGNLKEELVSKAADQQRILEEKESLTGKVKDLELEMDSIRNHRSTLEEQLSSKHHE
YNQLREEKEGLHVRSFDLEKTITERGDELSALQKKFEDTENEASARIVALTAEVNSLQVE
MDSLHAQKGELEEQLRRNGDEASDQIKDLMGQLNETKQELESLHSQKTEMELLLKKRTLE
NSEFLIQIGNLKEELANKTVDQQRTMEEKECLASKVKDLELEMDSIRNHKSELDEQLSSK
HHEYNQLREEKEGLHARSFDLEKIITERGDELSALQKKFEDTENEASARIVALTAEVNSL
RVEMDSLHAQKGELEEQLRRNGDEASDQIKDLMGQVDETKQELESLHSQKTEMELLLKKR
TLENSEFLIQIGNLKEELANKAVDQQRTMEEKECLVSKVKDLELEMDTIRNHKSELDEQL
RSKHHEYNQLREEKEGLHVRSFDLEKTITERGDELSALQKKFEDTENEASARIVALTAEV
NSLRVEMDSLQAQKGELEEQLRRRGDEASDQIKDLMGQVSETKQELESLYSQKTEKELLL
EKRTQENSGFLIQIGNLKEELANKAVDRQRMLEEKESLVAKVKDLELEMDSIQNHKRELE
EQLSSKHDEYNQLREEKEGLHVRSFDLEKIITERGDGLSALQKKFEDAENEASAQIVALT
AEVNSLRVEMDSLHAQKGELEGQLKCKGDEASDKIKDLMDQVTEMKQELESLHSQKTEME
LLLKKRTQENSEFLIQIGNLKEELSKKTLDQQRMLEEKESLVAKVKDLELEMDSIQNHKS
ELEEQLSSKHHEYNKLSEEKEGLHVRSFDLEKTLTDRGNELSALQKKLEDGASEATAQIL
ALTTQVNNLQQDMETLIAQKSELEDQIVSKSNEASAEIKGLMDRITEMQQELDSLSSQKT
EMESQLEGKVQENSEYFSQIGSLKDELVSKAADQQRMLEEIESLTARLKHLEMEVELIRK
HECELEEHIRAKDLEFNQLREEKEGLHVRSFDLEKIITDRGDEMSTLQQELHSLQDEKSQ
LELQIQRHKEESSESLTELENQRTELTSKVEEHQRMLREQEDAFNKLMEEYKQSEGLFHE
FKNNMQVTERRLEEMEEESRIHLESKAHIIADFETMVEDLKRDLEVKGDELSTLVEEVRN
IEVKLRLSNQKLRVTEQLLSEKEESYRRAEERFQQENRALEGKVAVLSEVITSNNESHVR
MITDISETVNNTLAGLESTVGKFEEDSINFKNRISEIAGEVQVARNWVKMAKSEKEQLKS
EASNLVEQLKYKKRKEEGEKESLIKAVSQLEKKVGELEKMMNLKDEGILDLGEQKREAIR
QLCVWIDYHRERCDYLREMLAKMNIRSQRT
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcatcaatggagagaatccataaagtctttttttggaaatcacatcgatcct
gtaaaggatgaacaactgaagggaaataaaacagagattgacgataaagtgaaaacgtta
ttggagcttataaaagaggaaggtttagatgaaaaggatgggaacggagatggaaacttg
aaaagacaaccacttattgaactaattgaggatttccatagaaattatcaatctctctat
gaccgatatgataatctcactgagatactaaggaaaaaaattcatggcaaaccggagaaa
gatacttcatctaccactagctcagactcagactcagatcattcaacaaaggaaaggagt
gataaaaatggaaaagctttgagcaaaaacccagaaacagaggaaattatcatgcattgg
aaatctgaagttgaaaggttggatggtgaaaaaactgaacttttggttgagaatggaaat
ctgaagcaaaaactggacaatgctagtaatgtagaagctgaactgaaccagagactggaa
gatttaaatcgggagagagagaatttaatcatggaaaaagagactgctatcaaaaggatt
gaagtgggagaggaaattgctgaagaattgaagtcgacgggtgataagttgaaagatgag
aaactagtcctcgagcaagaactggaagctgcgaaaggagaaatttccaatctggagcag
ctattggaatctacaaggcaggaaatgagcagtttaagtcacactcatagagctattgag
gaagaaaaagattctctagccttgaaaattttggagatttcaaatgagtttaagcaggcg
gagaatgcaatgcaagaactcatggcagagtcaagtcagttaaaggtgaaactgggtgac
aaagaaagtgaactttcaaatctcatgaagaagcatgagggtcatgagaatgaagcatca
gctcgaataaagggtttagaggctcaggtaacaggcttggaactggagctgagttcccta
agcacccagagaggagaaatggaaaagctgattgagagtacagcaactgaagccaaacag
ctggcggaggaaaatttaggactgaaagcccagatttcacagcttgaaacgatatcaaaa
gagagagaagaagaacttgctggtctcttgaagaaatttaaggatgatgagaatgagtca
ttgtctaaaatagctgatttgacagcacagatcaacaatctgcagctggaggtggattct
ctacaagctcaaaaagacgaattggaaaaacaagtggtccagaacagtgaagaagcatca
gttcaagtcaaaggcttaacagaacaggtcactgaactgaaactggaattggaatcttta
cacagcttgaaaatggaaatggaactaatgcttgagaagaaaactgaggagaattcagaa
tatcttattcagatgggaaatctgaaagaggagttggtgagcaaggctgccgaccaacag
agaatactggaagagaaagagagtttaacagggaaggtgaaggacctggaattggagatg
gactccatccggaaccacagaagcacactggaggagcagctaagcagtaaacaccatgag
tacaatcagttgagagaggaaaaggagggcttgcatgtaaggagttttgacttggagaaa
acaataacagagagaggggatgagctctctgctctgcagaagaagtttgaggatacagag
aatgaagcatcagctcgaatcgtggcattaacagcagaggttaacagtctgcaagtggag
atggattctttgcatgctcagaaaggtgaattggaagaacagctgagacgcaatggcgat
gaagcatcagatcagatcaaggacttgatgggccagctcaatgaaacaaaacaggaattg
gaatctctacacagccaaaaaaccgaaatggaattgctactcaagaaaagaactctagaa
aattcagagttcctgattcagatcggaaatctgaaagaggagctagcgaacaagactgtg
gatcagcagagaacaatggaggagaaggagtgtttggcatcgaaggtgaaggacctggaa
ttggagatggactccataaggaaccacaaaagcgaactggatgagcagctaagcagtaaa
caccatgagtacaatcagttgagagaggaaaaggagggcttgcatgctaggagttttgac
ttggagaaaataataacagagagaggggacgagctctctgctctgcagaagaagtttgag
gatacagagaatgaagcatcagctcgaatcgtggcattaacagcagaggttaacagtctg
cgagtggagatggattctttgcatgctcagaaaggtgaattggaagaacagctgagacgc
aatggcgatgaagcatcagatcagatcaaggacttgatgggccaggtcgatgaaacaaaa
caggaattggaatctctacacagccaaaaaactgaaatggaattgctactcaagaaaaga
actctagaaaattcagagttcctgattcagatcggaaatctgaaagaggagctagcgaac
aaggctgtggatcagcagagaacaatggaagagaaggagtgcttggtatcgaaggtgaag
gacctggaattggagatggacaccataaggaaccacaaaagcgaactggatgagcagcta
cggagtaaacaccatgagtacaatcagttgagagaggaaaaggagggcttgcatgttagg
agttttgacttggagaaaacaataacagagagaggggacgagctctctgctctgcagaag
aagtttgaggatacagagaatgaagcatcagctcgaatcgtggcattaacagcagaggtt
aacagtctgcgagtggagatggattctttgcaagctcagaaaggtgaattggaagaacag
ctgagacgcaggggcgatgaagcatcagatcagatcaaggacttgatgggccaggtcagt
gaaacgaaacaggaattggaatctctatacagccagaaaactgaaaaggaattgctactc
gagaaaagaactcaagaaaattcagggttcctgattcagataggaaatctgaaagaggag
ctagcgaacaaggctgtggatcggcagagaatgctggaagagaaggagagtttggtagca
aaggtgaaggacctggaattggagatggactccatccagaaccacaaaagagaactcgag
gagcagctaagcagtaaacatgatgagtacaatcagttgagagaggaaaaggagggcttg
catgttaggagttttgacttggagaaaataataacagagagaggggacgggctttctgct
ctgcagaagaagtttgaggatgcagagaatgaagcatcagctcaaattgtggcattaaca
gcagaggttaacagtctgcgagtggagatggattctttgcatgctcagaaaggtgaattg
gaaggacagctgaaatgcaagggcgatgaagcatcagataagatcaaggacttgatggac
caggtcactgaaatgaaacaggaattggaatctctacacagccagaaaacagaaatggaa
ttgctactcaagaaaagaactcaagaaaattcagagttcctgattcagatcggaaatctg
aaagaggagctatcaaagaagactctggatcagcagagaatgctggaagagaaggagagt
ttggtagcaaaggtgaaggacctggaattggagatggactccatccagaaccacaaaagc
gaactcgaggagcagctaagcagtaaacaccatgagtacaataagttgagtgaggaaaag
gagggtctgcatgttaggagttttgacttagagaaaacattaacggacagagggaatgag
ttatctgctctccagaagaaacttgaggatggggcgagtgaagcaactgctcaaattctg
gccttaacaacacaagtcaacaatctgcaacaagacatggaaaccttgattgctcagaaa
agtgaattggaggatcaaatagtgagcaaaagcaatgaagcttcagctgaaataaagggc
ttaatggaccggatcactgagatgcaacaggaattggattctctaagcagccagaaaacc
gaaatggaatcacagctcgagggaaaagttcaagaaaattcagaatactttagtcaaata
ggaagtctgaaagacgagctagtgagcaaggctgcggatcagcagagaatgctggaagag
atagagagtttaacagcacgcttaaagcacctggaaatggaggtagagttgattcggaaa
cacgaatgcgaacttgaagagcatataagagccaaagacctggagttcaatcagttgaga
gaggaaaaggagggcttgcacgttaggagttttgacttggagaaaataattacagacaga
ggggatgagatgtctactctacaacaggagctgcattccttgcaggatgagaaaagccaa
ttggagttacagatccagagacataaagaagaatcttcggaaagcctgacagaattggag
aatcagaggacggagttaaccagcaaggttgaagaacatcagagaatgctaagagaacag
gaagacgcattcaacaagttaatggaggagtacaaacaatctgaaggtttgtttcacgag
ttcaagaataacatgcaagtcacagaaaggaggttggaagaaatggaggaagagtcccgc
attcaccttgaatccaaagcccacataattgctgattttgaaaccatggttgaagacctg
aaaagagatctagaagtcaaaggagatgaactcagtactttggtggaggaggtccgcaat
atcgaagttaagctccgcttatcaaaccagaagctccgtgtcacagaacaattactatcc
gagaaggaagagagctacaggagagcagaagagaggttccagcaagaaaacagagcactt
gaaggaaaagttgcagtattatcagaagtaattacttccaacaatgaatcccatgtcagg
atgatcacagatatctcagagacagtaaacaataccttagctggacttgaatccacagtt
gggaaatttgaggaagactccataaacttcaagaaccgcatctctgaaatagcaggcgaa
gttcaggttgcaaggaactgggtgaagatggccaaaagtgagaaggaacaactgaagagt
gaggcaagtaacctagtggaacaactaaaatataaaaaacggaaggaagaaggtgagaag
gagagcctgataaaagctgtgagccaacttgagaagaaggtgggagaattggagaagatg
atgaatttgaaggacgaaggtatcttggatctgggggagcagaagagggaagccataagg
cagctgtgcgtctggatcgattatcaccgtgaacgctgtgattacctaagggaaatgcta
gcaaagatgaatatcagaagccagagaacttag
DBGET
integrated database retrieval system
