Vitis riparia (riverbank grape): 117933347
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Entry
117933347 CDS
T07274
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117933347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117933347
04147 Exosome [BR:
vri04147
]
117933347
04090 CD molecules [BR:
vri04090
]
117933347
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117933347
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117933347
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117933347
CD molecules [BR:
vri04090
]
Proteins
117933347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_21
AAA_5
AAA_15
DUF87
nSTAND1
AAA_30
AAA_14
AAA_19
APS_kinase
Motif
Other DBs
NCBI-GeneID:
117933347
NCBI-ProteinID:
XP_034710603
LinkDB
All DBs
Position
2:10617127..10626079
Genome browser
AA seq
1243 aa
AA seq
DB search
MDGPNPFSGQKKEGEEGKKPRRVPLLKLFAFADLYDCFLMAVGSVGACIHGASVPVFFIF
FGKLIDIIGLAYLFPAAASHKVAKYSLDFVYLSLVILFSSWAEVACWMHTGERQAAKMRM
AYVRSMLNQDISLFDTEATTGEVISAITSDIIVVQDALSEKVGNFMHYISRFIAGFAIGF
IRVWQISLVTLAIVPLIAIAGGVYAYIATGLIARVRKSYVKAGEIAEEVIGNVRTVQAFT
GEERAVQLYKTALSNTYIYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANG
GESFTTMLNVVIAGLSLGQAAPDISAFIRAKASAYPIFEMIERNTISNTNSKTGRQLHKL
EGHIQFRDISFSYPSRPDILIFNKLCFDIPSGKIVALVGGSGSGKSTVISLIERFYEPLA
GEILLDGNDIRQLDLQWLRQQIGLVNQEPALFATSIRENILYGKDDATLDEITRAAKLSE
AISFINNLPDRYETQVGERGIQLSGGQKQRIAIARAIVKNPSILLLDEATSALDAESEKS
VQEALDRVMVGRTTVVVAHRLSTIRNADMIAVVQHGKIVETGSHEELISNPSSAYASLVQ
LQETASLKRHPSQGPTMGRPLSMKCSRELSRTTTSFGASFHSDRESVGRIGAEGVEPVKS
KQVSARRLYSMVGPDWYYGLVGTICALIAGAQMPLFALGVTEALVSYYMDWDTTRHQVKK
IAFLFCGGAFITVIVHAIEHTCFGIMGERLTLRIREMLFSAILRNEIGWFDDANNTSSML
SSRLESDATLFRTIIVDRSTILIQNLGLVVTSFIIAFILNWRITLVVLATYPLIISGHIS
EKLFMQGYGGNLSKAYLKANMIAGEAVSNMRTVAAFCSEEKVLDLYSRELVEPANKSFTR
GQIAGLFYGISQFFIFSSYGLALWYGSILMGKELASFKSVMKSFMVLIVTALAMGETLAL
APDLLKGNQMVASVFELMDRKTEVMGDAGEELTRVEGTIDLKGIEFRYPSRPDVVIFKDF
DLRVRAGKSMALVGQSGSGKSSVLSLILRFYDPITGKVMIDGKDIKKLKLKSLRKHIGLV
QQEPALFATSIFENILYGKEGASESEVMEAAKLANAHSFICGLPEGYSTKVGERGVQLSG
GQKQRVAIARAVLKNPEILLLDEATSALDMESERVVQQALDRLMVNRTTVLVAHRLSTIK
NADQISVIQDGKIIEQGTHSTLVENREGAYFKLINLQQQQQQQ
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccaaacccattttcaggccagaagaaggaaggtgaagaagggaagaagcca
cgtagagtgcctttgctgaagctatttgcgtttgcagacctttatgactgttttctcatg
gctgttgggtccgttggtgcttgcattcatggagcttccgtgcccgttttctttattttc
tttggaaagttgatagatattattggattggcctatctttttcctgccgctgcttcccat
aaagttgccaagtattcattggattttgtatacctgagcttggttatattattttcatca
tgggctgaggttgcttgttggatgcatactggggaaaggcaagcagcaaagatgagaatg
gcctatgtgagatccatgctgaatcaagatattagtctttttgacactgaagcaaccact
ggagaggtcatttctgcaattaccagtgacattattgttgttcaagatgctctttctgag
aaggtgggcaacttcatgcactatataagccggttcatcgctggctttgcaattgggttt
attagagtatggcaaattagtcttgtgacacttgctattgttcccttaattgccattgct
ggtggtgtctatgcttatattgcaactggactcattgccagagttcgaaaatcctatgtg
aaggctggtgaaattgctgaggaggtgattgggaatgttaggacagtccaagcatttaca
ggagaagaaagagcagtacaattatacaaaacagctctctccaatacttacatatatgga
aggaaagcaggcttagccaaaggtctggggctgggttccatgcactgtgtccttttcctt
tcatgggcattgcttgtttggttcactagtgttgttgttcataagaatattgccaatgga
ggagagtctttcaccaccatgcttaatgttgttattgcaggcctgtcactaggacaggcg
gccccagacatttctgcattcattcgagccaaggcatccgcctatcccatttttgagatg
atagagaggaacacaatcagcaatactaactccaaaactggacggcaactacacaaacta
gagggccacattcaattcagggatatttcctttagttatccttctcgtcctgatatactt
atcttcaataagctgtgttttgatatcccttctgggaagattgtggcccttgtgggagga
agtggatctggaaaaagcactgtcatatctttgattgaacgtttctatgagcctcttgct
ggagaaatactactagatggaaatgatatcaggcagcttgacctacagtggctcaggcag
caaatcgggttggtcaatcaagagcctgcacttttcgctacaagcatcagggagaacatt
ctctatggaaaagatgatgccacccttgatgagattacacgagcagccaagctttcagag
gcaatttcttttattaacaacctccctgatagatatgaaactcaggtgggggagagagga
atacagttatcaggtggccagaagcaaaggattgcaatagcacgtgcgattgtgaaaaat
ccgtcgattctgctactggatgaagctacaagtgcacttgatgctgagtctgagaagagt
gtgcaggaggcacttgatcgtgttatggtgggacgaacaactgttgtagtggcccataga
ctttctaccataaggaatgctgatatgatagccgtcgttcaacatgggaagatagtggaa
actgggagccatgaggagctcatttcgaacccaagcagtgcttatgcatcacttgttcaa
ctgcaggagacagcttctctgaaacgccacccttcacagggacctaccatgggaaggcca
ctaagcatgaagtgttcacgggaattatcacgtacaacgacaagctttggtgcaagtttt
cattctgatagagaatctgttggtcggattggtgctgagggagtggaacctgtaaagtca
aaacaagtttcggcaagaagattgtattccatggtgggtcctgactggtattacgggctg
gtaggcaccatttgtgccctaattgctggagcacagatgccactttttgctcttggagtc
actgaggctctcgtatcctattacatggactgggacacaacacgccatcaggttaagaag
attgcattcctcttctgtggaggtgctttcataacagtcattgttcatgccatagagcac
acatgttttgggatcatgggcgagcggctcactcttcgcattcgagaaatgttattttct
gccattttgaggaatgagattggatggtttgatgatgcaaacaacacaagttctatgctt
tcatcccgtctagagagtgatgcaactctgttcagaaccataattgttgatcgttctaca
attctcatacagaatttaggtttggttgtcacctcattcatcattgccttcatcttgaac
tggaggatcacacttgtcgtcttggctacatatccattgatcatcagtggtcacatcagt
gagaaactcttcatgcaaggctatggtggaaatctgagcaaggcctatctcaaagctaac
atgattgccggtgaggctgtgagtaacatgcgcactgttgctgcattttgctctgaagag
aaggtccttgacctttactctcgggagcttgtggagcctgccaataagtcatttactcgt
ggtcaaattgctggcttattctatgggatttcccagttcttcatcttctcatcctatggc
cttgctttatggtatggctctatactgatggggaaagagcttgctagctttaaatccgtg
atgaaatcatttatggttctgattgtaacggcattagccatgggtgagactctggccctg
gccccagaccttctaaaggggaaccaaatggtggcatcagtgtttgaattgatggacaga
aagacagaggtaatgggtgatgctggagaagagcttacaagagtagagggtacaattgat
ctgaagggtatcgagtttaggtacccttccaggccagatgtagtgattttcaaggacttt
gatctaagagttcgagcaggcaaaagcatggcattagtggggcaaagcggctctggcaag
agttcagttctttctcttatactcaggttttacgacccaatcactgggaaagtgatgatt
gatgggaaggacatcaagaaactcaagctcaaatcccttagaaaacacattggtctagta
caacaagaaccagctctctttgccacatcaatctttgaaaacatcctttatggaaaagag
ggtgcttctgaatctgaagtaatggaagcagctaagcttgctaatgcacatagtttcatc
tgtggactccctgagggctattcaaccaaagttggagagagaggggtgcagctatctggt
ggccagaaacaaagagtagccattgcccgagctgtcctaaagaacccagaaatcttgcta
ctagatgaagccaccagtgctttagacatggagtcggagcgtgtggtgcaacaagctcta
gacaggttgatggtgaaccgaacaacagtcctggtggcacataggctgtccaccataaaa
aatgcagaccaaatatcagttatacaagacgggaagataatagagcaagggactcattca
actcttgtagagaacagggaaggagcatattttaagctaattaacctacagcaacaacaa
caacagcaataa
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integrated database retrieval system
