Vitis riparia (riverbank grape): 117933394
Help
Entry
117933394 CDS
T07274
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117933394
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117933394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF4523
YrhK
Motif
Other DBs
NCBI-GeneID:
117933394
NCBI-ProteinID:
XP_034710650
LinkDB
All DBs
Position
16:complement(20439013..20452379)
Genome browser
AA seq
778 aa
AA seq
DB search
MVKLASARESRLYGTRLARNRFEYINAGLYVFATIVLLSGFVSQLSRDPKSGLALMMIGL
GLLFVVNVHDLVAHMAGIDYRLGLMEFDLQLGLVEFSVPFVQAMGYLLSFLGILFLFLQE
EKGYGYFKLERHALNMLIAGPVLWVLGSIHNSCQIYERADGHIQILQQSVHIPFLMGSLL
FMVGSILNCHEQARFVHHGIDLLGMAWVWLGMFGSLLFFIGGLMNVVKVFKMQQMDGLRL
EKLRGGAQERLIHEREGQIPLILEDQRRRKIHVEEALPVVVPTPYRDVLVGHSLAIGIVV
GWKDFLTKCDAQGSKGLHISAVSFNQLGLLYGMASVSSQPQFRYTQPPSKVLHLRNLPWE
CTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKT
VYLQYSNRQEIVNNKTSADVAGNVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEK
TAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHR
SRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIENMQYAVTLDVLHMVFSA
FGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGGFCKLHISYSRHTDLSI
KVNNDRSRDYTSPVLSSQPSVLGQQPVPIPGPSTHQFEGAQYASPSDQQVIHQPSAGWAT
SAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMMPMQTQTGLPKSAAMPPYSH
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctcgcatccgccagagagagtcgcctctatggcactcgcctcgctcggaac
cgcttcgagtacataaacgccggcctctacgtcttcgccaccatcgttctcctcagcgga
ttcgtctcccagctctccagagaccccaaatcggggcttgcgctgatgatgataggatta
gggctcttgtttgtggtgaatgttcatgatctggtggcgcacatggccgggatcgattac
agattagggttgatggagtttgatcttcagcttgggcttgtggagttctcggttccgttt
gttcaggccatggggtatctcctctccttcttgggcattctcttcctcttccttcaggaa
gagaaaggctatggttacttcaaattggagaggcatgctttgaacatgcttattgctggc
cctgttctatgggtgctcggctcgatccataactcatgccaaatctacgagagagctgat
ggacacatccaaatcttgcagcagagcgtccacatcccattcttaatgggaagcttgttg
ttcatggtgggttcaattctaaactgccatgagcaagcacgattcgttcatcatggtata
gacttattgggtatggcttgggtgtggttaggcatgtttgggtcgctactgttcttcatt
gggggcctaatgaacgtggtgaaagtgttcaaaatgcagcaaatggatggattaaggctc
gaaaaactccgaggaggggcacaagagagactgattcatgaaagggaaggccaaatccct
ctcatcctagaagatcagaggaggagaaaaatacatgtggaggaagcattgccagttgtg
gttccaactccttacagggatgtccttgtaggccatagtttggcaataggcattgttgtg
gggtggaaagatttccttacgaagtgtgacgcgcaagggtccaaaggacttcatatctct
gcggtgtccttcaaccaattggggttattgtacggaatggcatctgtatcaagtcaaccg
caattccgttacactcaaccaccatccaaggtgctccatttaaggaacttgccatgggag
tgcacagaggaggaattgattgagctgggaaagccatttggtaaagttgtcaacacaaaa
tgcaatgttggtgcaaacaggaatcaagcttttattgaatttgcagatttgaatcaagct
attgcaatgatatcatattatgcttcatcttcagagccggctcaagtacgggggaaaacc
gtctacttacaatattccaaccggcaagaaatagtaaacaacaaaacatcagctgatgtt
gctggaaatgtactgctggtgacaatcgagggtgctgatgcacgccttgtgagcattgac
gttttacacttggtgttttctgcttttggatttgtgcataagatcactacctttgagaag
acagccggattccaggctttggtgcaattttcagattcagaaactgcctctgctgcaaaa
aatgccttggatggaaggagcatcccgaggtacctacttccagagcatttgggaccatgc
actcttaggattacattttctgcacacacagatttgagtgtgaaattccaaagccaccgc
agcagggactacactaacccttatcttcctgttgcttcatcagccatagatggaagtggt
caatttagcatgggttttgatggaagaaaagtagaacctgaaagtaatgttcttcttgca
tctattgagaacatgcagtatgccgtcaccttggatgtcttacacatggttttttctgct
tttgggcctatccaaaagattgcaatgtttgataagaatggaggagttcaggctttgatt
caataccctgacgttcagacagcaattgttgctaaggaagccttggaaggacactgcatt
tatgatggagggttttgcaagctccacatctcatattcacgccatacagatctcagtata
aaggtcaacaatgataggagcagagattacactagccccgtgttgagctcccaaccttct
gttctgggccaacaaccagttccaattccaggtccctccactcatcagtttgaaggagcc
cagtatgcctcaccttcggatcagcaggtgatacatcagccttcagcaggatgggccaca
tctgctgcagcagcaggagcaccaccaccaccacctcagtccatgccaatgcagcagcac
aaccacccctacatgccacctgggaccatgcctcctcaaccagtccctggaatgatgcca
atgcagacccagactggcctacctaagtcagcagcaatgcccccatacagccattga
DBGET
integrated database retrieval system
