Vitis riparia (riverbank grape): 117933693
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Entry
117933693 CDS
T07274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117933693
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117933693
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117933693
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117933693
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117933693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
117933693
NCBI-ProteinID:
XP_034711071
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All DBs
Position
16:complement(21048873..21080797)
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AA seq
635 aa
AA seq
DB search
MALQMTWQPSLLHQKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCD
SAVDRKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFLRYV
IDACHNTCLRLKKLRRKGNNDNGPSTTSVVKDIFGGALQSQVKCLSCGAESNKTDEIMDI
SLDVLHFNSLKQALQNFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQAPNVLVIQLKRF
EGLYGGKIDKLIAFEEVLVLSSYMNKASQDSHPEYNLFATIVHSGYSPESGHYYAYIKDA
MGRWYCCNDSYVSLSTLQGVLSEKVYILFFSRTNARISPPSKAFASHNVKNRDCNGNNTS
KNPRTALPVKTRHTKQNVEHSSGMDTSTISKVDKVPSSLQIKSNSFEKTVSKRVLATGNG
KLDVHKNQILEKNGDVVEKSEKGTPSLANSNGFSINKRVDAADSVNGFVSANENDKLQNI
SGNSGKVDLYEGNVVKSRMTAEGRSNFHEMHNGGVKCPPGVSGVKRKSQDKGSCILLAQD
AHSLAKVEEFKDGLKKEASLVLRSCGWTDRLYIFMHSRKRLCAQKSGDPPSSNESKKSFI
ADAKQSFISQIPESLKEKLIERLKSFSQEKQVSGP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcaaatgacttggcagccgagtctcctccaccagaaacgcaagaatggtcct
cctctagggttgaagaatctcggcaactcctgctatctcaacagcgtcctacagtgcttg
acatacacacctcccctcgccaatttctgcctcaatcacctccattcttcgctctgcgat
tccgctgtggatcgaaaacgcgagtgccccttctgcatactggagaagcgaattgttcgg
tctttgagcatggatctcacccaggacgctccctccaagatccagagctgtctccggata
tttgcagaacactttcgattggggcggcaagaggatgcccacgagttcttgcgttatgta
attgacgcctgtcacaacacttgccttcgtctcaaaaagttgaggcgcaaggggaacaac
gataatgggccctctactactagtgtggtcaaggacatctttgggggtgctctgcagagt
caggtcaagtgtctctcttgcggggctgagtccaacaagaccgatgagattatggatata
agccttgatgtcttgcatttcaattctcttaaacaagcattacaaaactttttccagcct
gaggttttggacggtaacaacaagtacaaatgtgacaattgtaagaaattggtgtcagca
aggaagcaaatgtctattcttcaagcacccaatgtccttgtaatccagctcaagagattt
gagggcttatatggtgggaagattgataagctgattgcatttgaagaagttttggtgctc
tcgagctatatgaacaaagcaagccaggattcacatcccgagtataacctttttgctact
attgtgcattcaggctactcacctgagtcaggacactattatgcatatatcaaggatgca
atgggtcgctggtattgctgcaacgattcttatgtttcactttcaaccctgcagggggtt
ttgtcagagaaggtttacattcttttcttttctcgtactaatgcaaggatctcacccccc
agcaaagcttttgcgtcccataatgtgaagaaccgagattgcaatggcaacaatacatct
aaaaatccaaggacagctcttccagtgaaaacaaggcatacaaaacaaaatgtcgaacat
tcctctggaatggatacttccactatatctaaggttgataaggtgccttctagcctacag
attaaatcgaatagctttgaaaaaactgtttccaagagggttcttgcaactggtaatgga
aaacttgatgtgcataagaatcaaatattggaaaagaatggggatgtggtggagaaaagc
gagaaaggtacgccatctttagcaaacagcaatggttttagtataaataaaagagttgat
gctgctgatagcgtgaatggctttgtatctgcaaatgaaaatgataaacttcagaatatt
agtggtaattcgggaaaagtggatttgtatgagggtaatgttgtgaaaagcaggatgaca
gcagaaggaaggtctaacttccatgaaatgcataatggtggtgtcaaatgtccccctggt
gtttcaggggttaagagaaaatcacaggacaagggttcatgcattttacttgcacaagat
gctcattctctggcaaaagttgaagaattcaaagatggtctcaagaaggaagcttctttg
gttctgagatcttgtggttggacggataggctttatattttcatgcattcaaggaagagg
ttatgcgctcaaaaatcaggagaccctccaagcagcaatgaatcaaagaagtcatttatt
gctgatgcaaaacaatctttcatctcacaaattcctgagtcactgaaagagaagctgatt
gaacgtctaaaatcattcagccaggagaaacaagtttcaggtccttga
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