Vitis riparia (riverbank grape): 117933797
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Entry
117933797 CDS
T07274
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117933797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117933797
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117933797
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_16
AAA_15
AAA_5
AAA_30
AAA_25
AAA_14
AAA_28
Motif
Other DBs
NCBI-GeneID:
117933797
NCBI-ProteinID:
XP_034711230
LinkDB
All DBs
Position
16:complement(16324916..16338143)
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AA seq
717 aa
AA seq
DB search
MASATLPLPLRSHLTRLKPPISHAPRAIACHVKLSHSHSNPFPPFSLLRSRSKGVVRPPS
AYVSGPASDPIITEPDPKVESSNDAHDETVEPPSAISSSLLWSLLMRYKLRLAVSAVTLI
GCSACTLSMPLFSGRFFEVLIGTRPEPLWRLLSTVGVLYTLEPVLTIIYVVNMNTIWEKV
MSTLRAQIFRRLLIQKVEFFDRYKVGELTALLTSDLGSLKDIVSENISRDRGFRALSEVI
GTICILFTLAPQLAPILGVLMLTVSVLVAVYKRSTVPVFKAHGLAQASISDCATETFSAI
RTVRSFSGEKRQMSMFGSQVMAFQSSGIKLGTFKSLNESLTRVAVYISLMSLYCLGGSKV
KAGELSVGTIASFIGYTFTLTFAVQGLVNTFGDLRGSLAAVERINSVFSGGQIDEALAYG
LERDIRRKEVDDEKLGLFFVNGFDEKNIFPNIHYMSALRSASNVHSLAWSGDVCLEDVHF
SYPLRPDVEILNGLNLRLKCGTVTALVGSSGAGKSTIVQLLARFYEPSRGCLTVSGEDVR
TFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDNNVSKDDVIKAAKAANAHDFIISLP
QGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAISERLVQDALSHLM
KGRTTLVIAHKLSTVQNADQIALCSSGRIAELGSHFELLAKKGQYASLVGTQRLAFE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcaactctcccactccctctccggtcgcacctcactcggctcaaaccccct
atcagccacgcgccaagagccatcgcctgtcacgtcaaactctcccacagccactccaac
cctttcccgccattttcacttcttcgaagcagatcaaaaggcgtcgtgaggcccccttct
gcctacgtgtcgggtcctgcttccgacccgataataaccgagccggaccctaaggtggag
agttcgaacgatgctcatgatgaaactgttgagccgccgagtgcgatcagttcgagtctc
ttgtggagtctcctgatgcggtacaagctgagactcgctgtttcggccgtcactctcatt
ggttgctccgcttgtactctctcaatgcctctattttcagggagattttttgaagtactt
ataggcactagaccagaacctctgtggagactgcttagtactgttggagtgctgtataca
ttggagccagttttaactattatttatgttgtaaacatgaatactatttgggagaaggtt
atgtcaaccttacgcgctcagatttttagaagactattgattcagaaggtggagtttttt
gacagatacaaggttggtgaactcactgctttgttaacatctgacttgggttctcttaaa
gatattgtgagtgaaaacatttcaagggatcgtggattcagggcactttctgaggtcatt
ggcacaatatgcatcctgttcactttagccccccaacttgcaccaattttgggcgtactg
atgcttactgtatctgttttagttgctgtatacaagcggtcaactgtgcctgtttttaaa
gctcacggattggcccaagcttccatatcagattgtgcaacagaaacattttctgcaatt
cgtactgtaagatcctttagtggcgaaaagcgtcaaatgtctatgtttggtagtcaggtt
atggcttttcagagtagtggtataaagcttgggaccttcaaatctcttaatgaatcactg
actagagttgccgtctatatttctttgatgtccttgtattgtcttggtggaagcaaagta
aaagcgggtgaactctctgttggaaccattgcttcttttattggatacactttcacatta
acttttgctgttcaagggctggttaatacatttggagatcttcgtggaagtcttgctgct
gttgagaggattaattctgtgttttctgggggacaaattgatgaggcccttgcctatggt
ttagaaagagacatccggagaaaagaagtggatgatgaaaaacttggattattctttgtc
aatggttttgatgaaaaaaacatatttccaaatattcattacatgtcagccttgagatca
gctagcaatgtgcatagcctagcttggtctggtgatgtttgtcttgaagatgtgcatttt
tcttaccctttgaggcctgatgtggaaatcctaaatggtcttaatctaaggctaaaatgt
ggaactgtaactgctctagttggctcaagtggtgctgggaaaagtacaatagtacagcta
ttggcacgtttttatgagccaagcaggggctgcttaacagtttccggagaggatgttcga
acatttgacaagagcgaatgggctcgggttgtctctatagtaaaccaagaacctgttcta
ttctcggtgtctgttggagaaaatattgcctatgggcttcctgacaataatgtatccaag
gatgatgtgataaaggcagccaaagctgctaatgctcatgatttcataatttctcttcct
cagggttatgacactctagttggtgagcgtggaggtctactgagtggaggacaacggcag
agaattgccattgcaagagctcttctcaagaatgccccaatcctgatacttgatgaggcg
acaagtgccttggatgcaatcagtgagcgcctggttcaagatgctctgagccatctgatg
aaaggaaggacaacattagtgattgcacacaagttaagtacagttcagaatgcagaccag
atagctctttgttccagtggaaggattgcagagcttgggagtcattttgagttattagct
aagaagggccaatatgcttcattagttggcactcagagacttgcttttgagtga
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