Vitis riparia (riverbank grape): 117933807
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Entry
117933807 CDS
T07274
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117933807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117933807
03029 Mitochondrial biogenesis [BR:
vri03029
]
117933807
Membrane trafficking [BR:
vri04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117933807
Atg1 complex
117933807
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117933807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117933807
NCBI-ProteinID:
XP_034711242
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Position
16:complement(22967191..22972835)
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AA seq
624 aa
AA seq
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MDLQSHPQPELGRLEQIVSQFLLKSLHIVLDSRIPSLRPARDRSGNVSGISRVRKSDKWF
SLQLGDRPAALDNLHFWHRNLMDPMIIDIILVREGSNSSSSMDNVYSTAAVGTSVETVIE
RWVVQYESPRLMATPTGESSATYKKIYKKLIILLRSLYSTMRLLPGYRVFRQLSSLTQSY
DFDIIYKVSSFTEPFSRAEEEVMKHYSFLPVEALSGRLCISVTYHQTLSDFNLEPLTAFP
PTIITDYVGSPAADPLKAFPSSEKGIRATSFPLRGRGVRSPSSAPFQRPHSWTSGGHRGA
PFTPNQPLSGSPPAFRMPYMPYDLPTQPLDIYGHGVQNYRPPTHQKATSFDEYQLSPPFS
PSQSPSPPTYFSSSNPMYSRFSSETAPVTIPLPLVGRGSRYLSPNSSDPSRHSLPPLSPR
STRHDPSSQESPSGNRSFRKTEGLRIGDYSGTTNNYSGQKVLKDSKDDSGRFSGLLSSSG
SPRIGFSRCSSRLSFQDDLDDCDFTGPFDVDDVDTTDSHASRNLDGKRASEFPSLAFPMT
GKSPDAAVGVLVNMLRRAPPLRQDPSCCSSHSLKTEPEGEAGAASEFFMARKTADALEEL
RSYKEMKDLLLSKSGAHVVTREET
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcagagccatcctcagcccgagttggggcggttggaacaaatagtttcgcaa
tttcttttgaagagcttgcacattgtactagactctaggatcccttctcttcggccggcc
cgtgatcggagtggtaatgtttcggggatttctcgggttaggaagagtgacaaatggttc
agtttacaactaggagaccgccctgctgctttggataatttgcatttctggcataggaac
ttgatggatcctatgataattgatataatacttgttcgggaagggtcaaattcttcatcg
tctatggacaatgtatatagtactgcagcagtagggacatcggttgagactgtaatagag
aggtgggttgttcagtacgagtctccacggttgatggctactcctactggtgaaagttca
gccacctacaagaaaatttacaagaagttgatcatacttttgcggtcactttattcaaca
atgaggcttcttcctggctatcgggtttttcggcagctaagttcattgactcaaagttac
gatttcgatataatttacaaggtttcatcgtttactgagccgttctcaagggcagaggag
gaagtgatgaagcattatagttttttgcctgtagaggccctttctggtcgcctctgtata
tctgtgacatatcatcaaacactttctgatttcaaccttgagcccttgacagcgtttccg
ccaacgattattacagattatgttggtagccctgctgctgatcctctgaaggctttcccc
tcgtcagagaagggtattcgtgctacttcctttccattgcgaggacgaggagtacgatct
ccgtcttctgcaccatttcaacgcccacacagctggacgagtggtggccacagaggagct
ccttttacaccaaatcaacctctcagtgggtctccaccggcatttcgcatgccttatatg
ccatatgatcttccgactcaacctcttgatatatatggtcatggggtccaaaactataga
cccccaacccatcagaaggctaccagttttgatgagtatcaactttcacctccattttcg
ccatcacagtccccatctcccccaacatacttttccagtagtaaccctatgtattctcgt
ttctcttcagaaactgctcctgtaactatcccacttccattggtgggcagaggctctagg
tacctttcgccaaattcatctgatcctagtagacattctcttccacctctgtctcccagg
agcacaaggcatgatccttcatcacaggagtctccatcgggaaataggtcatttagaaaa
acagaaggtttaaggataggagattactctgggacaacaaataattattctggtcagaag
gtattgaaagatagcaaagatgattcagggcggttctcggggttgctatcttccagtggc
tcaccacgtattggcttttcaagatgctctagcagattatctttccaggatgacttggat
gattgtgacttcactggtccttttgatgtggatgatgttgatacaacagattcccatgcc
agtcggaaccttgatgggaaaagagcctcagagtttccttcactggcatttccaatgact
ggaaaatcaccagatgctgctgttggtgttcttgttaacatgctaaggagggcgcctcct
ctgcgccaagatccaagttgttgctcatcccactctttgaagactgaacccgagggagaa
gcgggtgcagcatctgaattttttatggctcgaaagacagctgatgcactggaagagctc
aggagttacaaagaaatgaaagacttgctgctctctaagagtggagcacatgttgttact
agagaagaaacttaa
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