KEGG   Vitis riparia (riverbank grape): 117933992
Entry
117933992         CDS       T07274                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117933992
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117933992
   04031 GTP-binding proteins [BR:vri04031]
    117933992
Membrane trafficking [BR:vri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    117933992
 Autophagy
  Other autophagy associated proteins
    117933992
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117933992
  Exosomal proteins of other body fluids (saliva and urine)
   117933992
  Exosomal proteins of colorectal cancer cells
   117933992
GTP-binding proteins [BR:vri04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    117933992
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 SRPRB Gtr1_RagA LANC_like FeoB_N AAA_5 AAA_29 Septin AAA_16 AAA_22 ABC_tran AAA_7 Dioxygenase_N TniB
Other DBs
NCBI-GeneID: 117933992
NCBI-ProteinID: XP_034711472
LinkDB
Position
16:5518813..5526151
AA seq 203 aa
MNQEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMN
NARPPSVQLQGQPVNQKSGCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcaagaatatgactacttgttcaagcttttgctaattggggattctggagttggc
aaatcgtgccttctgctgagatttgctgatgattcatatctagacagttacataagcaca
attggggttgattttaaaatacgcactgtggagcaagatgggaagacaattaaacttcaa
atttgggacaccgctggacaagaacgcttcaggacaatcactagcagctactatcgtggg
gcacacggtattataattgtttatgatgtaacagaccaagagagcttcaataatgtgaaa
caatggttgaatgagattgaccgttatgcaagtgaaaatgtgaacaagcttctggttgga
aacaagtgtgacctcaccgctaacaaagtcgtgtcttatgaaacagccaaggcatttgct
gatgaaattggaattccattcatggagacaagtgcaaaaaatgctaccaatgtggaacag
gcttttatggccatggctgctgacatcaagactaggatggcgagtcaaccagcgatgaac
aatgcaaggccaccatcagttcagttgcaaggacaaccagtgaaccagaagagcggatgc
tgctcgtcttag

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