Vitis riparia (riverbank grape): 117934056
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Entry
117934056 CDS
T07274
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
vri
Vitis riparia (riverbank grape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-GeneID:
117934056
NCBI-ProteinID:
XP_034711540
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Position
16:complement(5058861..5125873)
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AA seq
1150 aa
AA seq
DB search
MSKENAAINEEITEEQRARISQNFRAAKALLARKRPRETSANFLNRLHQRNGDANRIETL
AQAENIKRLPLAEVSINTPSPFSKKGFKTTDGECEKSSCSGGITINRSKSVHDGLCVRAV
GVPLVDGFILDSSETPMKGKVCPSVGDSLMSTNILDDDLCESILEEIDALCEQKSAAKTE
GQCPNSVISMESQFRVKNGGKDSSNWGSVDADKFLLTASMLRLEGDLNSGAEQAAQPASM
PDEYSKYLQSLNDTQREAACSDISIPLMIVAGPGSGKTSTMVGRILMLLNEGISPSNILA
MTFTTAAASEMSGRIAAVAGKETAKEVTVSTFHSFALQLCRSHAEKLGRTSEFLIYGHGQ
QRRAIIEAVRIFETENSKKNNNGCKVGEESNDINSPQNFKDKSKKWQKFVTQAKASGKTP
EECRNMGDEIGASILGNYSNILRTCNALDYHDLISCSVKLLSDFPEVFRECQESWKAVVI
DEFQDTSAMQYCLLRILASHNRITIVGDEDQSIFSFNGADVSGFNSFRKDFPNHKEIRLN
KNYRSTRCILEAASSLIQNNMKRCQSKKVLTDNSTGSRVTIKECHSEEAQCAFVVDKILE
ITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDRKIPFNIHGVAFYRKKVVRAIVAMLR
TTLSGCDDGSYRQVFKALLPCDKEDKKRVIEHIDKISITRKCSFVSAASDIFSAKVSGTF
KRSQLTQGRKVLFTLDMISKLVHREQSISAVITSVANMIPQKYLLEQRAVVDVDGRKLLN
EDNDIRSVLQYLLDDVSDFLSTKFTASKEESDVIVKEGGCGHVLKAFIDFISERERENFR
SRRHDNEESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVKENGTSIEEERRLL
YVGMTRARKKLFILYVLMDSSWQMLQPSRFLKEIPHHLLEVQGELSVQGLHAKQESTPIE
NAQFTIGEGGDKKSSREDILPNEGLNIQIDECSKETTEPMGSCDGNSFLRRFNVEDRSVV
SHLFHHWAKKQAFQEPKRLLDKVGFAIDERLRVTKNKHKDALRELKSSLKCDEAFHYAEY
ILKWEKIPADKRAHLMRMKQEHFLKLRIENAMGSSAPTSKQISYLQNLGCTVVPTSRLHA
SHLIEQYKSL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggaaaatgcagccataaatgaagaaatcacagaggagcaaagggctcgaatt
tctcagaattttagagcggcgaaggcccttctcgctcgcaagcgccctcgtgaaacctcc
gccaattttctcaaccggcttcatcaaagaaatggggatgcaaatagaattgaaacattg
gctcaggcagaaaacatcaaaagacttcctcttgctgaggtatcaataaacacaccgtca
ccattttctaaaaagggattcaagacaacagatggtgaatgtgaaaaaagttcatgttct
gggggcataactatcaataggagtaagtcagttcatgatggtttgtgtgtgagagctgtc
ggcgttccgctagtggatgggtttatattagactcttctgaaactccaatgaaagggaaa
gtatgcccaagtgtaggtgactctttaatgtcaacaaatattctagatgacgatctttgt
gagtccattttggaagaaatcgatgcattgtgtgagcagaagtcagcagcaaaaacagaa
ggacagtgtccaaatagtgtcatttctatggaaagtcaatttagagtaaagaatggtggg
aaagatagttccaactggggttctgttgatgcggataagtttttactgactgcgagcatg
ctgcgtttagagggtgatttaaattctggagcagagcaagctgcacagcctgcaagcatg
cctgacgaatattcaaagtatttgcaatctctgaatgacacgcagcgggaggcagcttgt
agtgatatttcaatccctctgatgattgttgctggtccgggaagtggaaagacttctaca
atggttggtcgcattcttatgctgcttaatgagggcatcagtccgtccaacattctagca
atgactttcactactgcagctgcttctgagatgagtggtcgaattgctgcagtggctggg
aaagagacagcaaaagaagttacagttagcacattccactcctttgctttgcaactctgt
cgttcacatgctgagaagttaggacggacatcagaatttttaatatatgggcatgggcag
cagagaagagcgattattgaggctgtgcggatattcgaaactgaaaacagcaaaaaaaat
aataacggttgcaaagttggtgaagagtcaaatgatataaattctccacaaaacttcaag
gataagtcaaagaagtggcagaagttcgttactcaggctaaagcttctggaaaaactcct
gaagaatgtcgtaatatgggtgatgagatcggagcatcaattcttgggaactacagtaac
atattgagaacttgtaatgctctggactaccatgacctaattagctgttcagtgaagctg
ctaagtgattttcctgaagttttccgggagtgccaggaatcttggaaagcagttgtaata
gatgagtttcaggacacaagtgccatgcaatactgtcttcttcgtattcttgcttcgcat
aaccgcataactattgttggtgatgaggatcagtccattttcagttttaatggagccgat
gtttctggatttaattcatttcgaaaagatttcccaaatcacaaagagatcaggcttaat
aaaaactatcggtccacacgctgtattcttgaggctgcatcatctcttattcaaaacaat
atgaagcgttgccagtcaaagaaagttcttactgataattctactggatctagggtaact
atcaaagaatgtcacagtgaggaagcacagtgtgcatttgttgttgataagattttggaa
attacttctgatgattcagttgctaagtactcatttggcagtgtagcaattctataccgg
aggcaggtatctggaaaagtattccaaacagcctttcgtgataggaagataccgtttaac
attcatggtgtggccttctacaggaaaaaggtagttagagccattgttgccatgcttaga
acaacattatctggttgcgatgatggctcatatcgtcaagtattcaaggctttgctacct
tgtgataaagaggacaagaaaagggttattgaacacattgataagatttcaattaccaga
aaatgcagttttgtatcagctgcctctgatatttttagtgcaaaggtctccggcaccttc
aagaggagtcaactaacccaaggacgcaaagtgctgtttacactagacatgatatccaaa
cttgttcacagggagcagtcaatttcagctgtcataacttcagtggcaaacatgatacct
cagaaatacctacttgagcagcgagcagttgttgatgttgatggaaggaaattgctgaat
gaagacaatgacattagatctgttctacagtatctcctggatgatgtctctgatttttta
tcaacgaaatttactgcaagcaaagaggagagtgatgttattgtaaaagaaggcggctgt
ggtcatgtactaaaagcttttattgacttcatatctgagagggagagagaaaattttcgt
tctcgcagacatgataatgaagagtctgtcacattgactaccattcatcagtcaaagggc
ttagagtgggatactgtttttatagtgaaggcaaatgaatctgagatccctttgttgcat
gaatttaatggtgttgtgaaggaaaatggtacctcaatagaggaggagcgacgcctgttg
tatgtggggatgactcgagctagaaaaaaactgttcattctatatgttctcatggattca
agttggcagatgcttcaaccttcaagatttctgaaagagattccacatcaccttctagag
gttcagggggagctgagtgtacagggtttacatgcaaagcaagaaagtactccaatagaa
aatgcccagtttactattggtgaaggaggagacaagaaatcttctagggaagatatttta
ccaaatgagggtctcaatattcaaattgatgagtgttcaaaggaaacaacagaaccaatg
ggctcatgtgatgggaatagttttttaagaagattcaatgtcgaggacagatcagttgtt
tcccacttattccatcactgggccaagaagcaagcatttcaagagcctaagaggttgctg
gataaggttggctttgcaattgatgaacgtttgagggtcacgaaaaacaaacacaaggat
gctttgcgtgagctaaagtcctccttgaagtgtgatgaagcatttcactatgcggaatat
attttaaaatgggagaaaattcctgctgataaacgtgctcatttgatgaggatgaaacaa
gaacatttcctgaagctgagaattgagaatgcaatgggatcatctgcccctacatccaag
cagatctcatatcttcaaaatctgggatgcacagtggtccctacatcgcggctccatgct
tctcatttgattgagcaatacaaatcattatga
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