Vitis riparia (riverbank grape): 117934086
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Entry
117934086 CDS
T07274
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03010
Ribosome
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117934086
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117934086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vri03011
]
117934086
04121 Ubiquitin system [BR:
vri04121
]
117934086
Ribosome [BR:
vri03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117934086
Archaea
117934086
Ubiquitin system [BR:
vri04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117934086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
Ubiquitin_5
DUF2604
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
117934086
NCBI-ProteinID:
XP_034711586
LinkDB
All DBs
Position
16:complement(23399658..23402276)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMQLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaactgggaagaccatcaccctcgaggttgaatccagc
gataccatcgacaatgtcaaggccaagatccaggacaaggaagggattcctccggatcag
cagcgactgatatttgctggaaagcagcttgaggatggccgcactcttgctgattacaat
atccagaaagaatcaactctgcatctggttctgaggcttcgtggtggtattattgagcca
tccttgatgcaattggctaggaaatacaatcaggacaaaatgatctgccgcaaatgttat
gcacgcctgcacccacgtgctgtcaactgcaggaaaaagaagtgtggccacagcaaccag
ttgaggccaaagaagaagatcaagtag
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integrated database retrieval system
