Vitis riparia (riverbank grape): 117934139
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Entry
117934139 CDS
T07274
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117934139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117934139
03036 Chromosome and associated proteins [BR:
vri03036
]
117934139
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117934139
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
117934139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR54
Nbas_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
117934139
NCBI-ProteinID:
XP_034711666
LinkDB
All DBs
Position
16:complement(5043386..5047141)
Genome browser
AA seq
455 aa
AA seq
DB search
MSRFNGDWYSPTRLHDSPTQYHFPGDRFIPNRSLMDLDQAHTLLTSRTREVCNSTFSQDE
YRRKLEENLFFDSEGRPFRMLVFRGSPKSSKKSIRFLDEMQQQDEAEALHNKNIKQFQYR
HLPKKESRVLDAPRINDDYYLNIMDWGKRNILAIALGSDLYLWNAETGHSQKLMQVDDQE
DYPTSIAWCEDGRRVAVGHLSSKLQLWDAETFKLIRSLEGHDDRVGIAAWNGQILTSGSR
DKSIINHDVRARNSLTCRVQIHSQEVCGLKWSITGNKLASGGNENLIYIWEASKMCSSNF
LHRFSGHQAAVKALAWCPYQPDVLASGGGTLDGCIKIWNIQKGTCINSIGANAQICGLEW
NRHHKEILSGHGFSATGHQNELCLWKYPSMSKLGELKCHSSRVLHLSQSPDGSTVVSAGA
DETLRFWEVFGPPVTDSSRVSDLDSLLSFKRSLIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattcaacggcgattggtactcgcctactcgcctccacgacagccccacccag
taccattttccgggtgataggtttattcctaatagaagtttgatggatcttgatcaagcc
cacactttgctgacatccaggacaagagaagtttgcaattccacattcagccaggatgaa
tacaggcggaagttggaggagaatctgttttttgattcggaggggagaccatttaggatg
ttggtcttcagaggaagccccaaaagtagtaagaaatcaattcgttttcttgatgagatg
cagcagcaggatgaggcagaggcactgcataataaaaacataaagcaatttcagtatcga
catttgcctaagaaagaatctagggtcctggatgcaccgagaatcaatgatgactactac
ttgaacatcatggattggggaaaaagaaacattctggctattgctttgggctcagacttg
tacctatggaatgctgagacaggacacagtcaaaaattgatgcaagtagatgatcaagag
gattaccctacaagtatagcttggtgtgaggatggcagaagggttgcagtagggcatttg
agctcaaaacttcagctctgggatgctgagactttcaagctcattagaagcctggaagga
catgatgacagggtaggtattgctgcatggaatggtcaaattctaacatctggaagccga
gacaaatccattatcaatcatgatgtaagagcaagaaacagtttgacttgccgtgtacaa
atacacagccaagaagtttgtggattgaaatggtcaatcacaggaaacaaattggcaagt
ggtggcaatgaaaatctcatctacatttgggaagcttccaagatgtgctcatccaatttc
ttgcaccggttcagtggtcatcaagctgcagtcaaggcccttgcctggtgcccatatcag
cctgatgtacttgcctctggaggaggcacattggacggatgtatcaagatatggaacata
caaaaggggacatgcatcaacagcataggtgctaatgcacagatttgtggattggaatgg
aacaggcatcataaggagatattgagtggtcatggcttcagtgcaactgggcatcaaaat
gagctatgtctgtggaagtatccctccatgtccaaactaggagagctcaagtgccactca
tccagagtccttcatctctcccagagcccagatggatcaactgtggtatcagctggtgca
gatgagactcttcgcttttgggaggtttttggaccacctgtgacagacagttcaagggtt
tcggatctggacagcctcctgtcttttaagagatcactcataagatga
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