Vitis riparia (riverbank grape): 117934248
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Entry
117934248 CDS
T07274
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117934248
Spliceosome [BR:
vri03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117934248
Other components
Complex C specific factors
117934248
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117934248
NCBI-ProteinID:
XP_034711809
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Position
16:complement(290750..299803)
Genome browser
AA seq
863 aa
AA seq
DB search
MDEYQEMESFGVDNDFEDGQWINGEFYYRKRKDKRHQTKDDVLYGVFADSDSDDSSSTKK
RRKDLSNKTDFTKPVNFVSTGVVIPTQEIERNSREQVNEDDGGGGGDRPGLGLGSTNFGS
GIGFTSNSGSFSKNVGNNEVDEHDNDDDGFLPTAFGRKIKEGVQRREREREKSKLVKKSQ
GGRREAELGDVGRFEKFTKGIGMKLMEKMGYTGGGLGKNEQGIVAPIEAKLRPKNMGMGF
NDYKETKLPALQEPEEKKSLPGTTQAVNKSKGKLWTKQASGKKKDRYITAEELLVKKQEQ
GIEVVQKVFDMRGPQVRVLTNLEDLNAEEKARENDIPMPELQHNVKLIVNLAELDIQKLD
RDLRNERETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAK
YFGDLRRRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGG
DDIFDLSDVGSPYTQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTM
LDNIVLPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHP
SDGSAYTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWAS
VIPIHRMVELLELHFFPKWQQVLYHWLCSGPNFEEVTQWYLGWKGLLPQELLANEQIRYQ
LNIGLDMMNQAVEGMEVVQPGLRENISYLRVLEQRQFEAQQKAAADARLQAAASLGGTTQ
MDGIGGVLEMSLKEVIEAHAQQHELLFKPKPGRMYNGHQIYGFGNISIIVDSLNQKVFAQ
HEERWSLVTLEQLLEMHKNSILK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaagagatggagagctttggcgtggacaacgacttcgaagacggtcaa
tggatcaacggcgaattctactaccgtaagcgcaaggacaagcgccaccagaccaaagac
gacgtcctctatggtgtattcgccgactccgattccgacgactcttcctctaccaagaag
cgccgtaaggacctctccaacaagaccgatttcaccaagcctgtcaatttcgtctccacc
ggcgtcgtcatacccactcaagaaatcgaacgtaattccagggagcaagtcaacgaagac
gacggcggcggcggcggcgacaggcccggtttgggcctcggttctaccaatttcggttca
ggtataggctttacttccaattccggttcgttttcgaaaaatgttggcaataacgaagta
gatgaacatgataacgatgatgatggtttccttcccactgcgttcggaaggaagattaag
gagggtgtccagcggcgggagagagagagggagaagtcgaaattagttaagaaatctcaa
ggagggagaagagaggctgaattgggggatgtcggacgatttgagaagtttaccaaaggg
attgggatgaaattgatggagaaaatgggttacacaggaggtggtctggggaaaaatgag
caagggattgttgctccgattgaggctaagttacgacccaagaatatggggatgggtttt
aacgattacaaggagacgaaattgcctgcattgcaagaacctgaggagaagaaatcgttg
cctgggaccacgcaggctgtgaataagagtaaagggaagctttggacgaagcaagccagc
gggaagaaaaaggacagatacattacagctgaggagttgcttgtgaagaagcaagagcag
ggtattgaagttgttcagaaggtgtttgacatgagggggccccaggttcgcgttttgacg
aatctggaggatttgaatgctgaggagaaagccagggaaaatgatataccaatgcctgaa
cttcagcataatgtgaagttgattgtgaacttagctgagcttgatatacagaagttggac
agggatttgaggaatgagagagagacagtggtgagcttgcagatggagaaggagaagtta
caaaaagaggcagctcatcagaagacacagttggataatacagaacaaatagttagtgta
ttggacataataagtgaggagaattcagtaggaaaattgacattggattcacttgcaaag
tattttggtgatttacgaaggagatttgccgaagattacaaactttgtaatctgtcatgc
attgcttgctcatttgctctccctttacttattagagtgttccagggatgggatcccctt
caaaatccattgcatggcttggaagtgatgtcctcatggaaaaatctattgcaaggaggg
gacgatatttttgatctctctgatgtgggatcaccttatacacagttggttatggaagtt
gttttacctgctgtaagaatatctggaatcaacacttggcaagccagggaccctgaaccg
atgcttcgctttttggagtcatgggaaaaattgcttccttcctcagtccttcaaaccatg
ctcgacaacattgttttgcctaaattatcttctgctgtagatgtgtgggacccacgtagg
gaaaccgttccaatccatgtttgggtgcatccatggctaccactgttgggtcagaagttg
gagagtttatattggaagatatgtgataaattgggcaatgctcttcaagcatggcatcct
agtgatgggtctgcttacactatcctgtcaccttggaagacagtttttgactctacaagt
tgggagagacttatggttcgatcaataattccgaaattgatgaatgtactgcaagaattt
caagtaaacccagcaagtcagaacctcgatcagttccattgggtcatgtcttgggcttct
gtaattccaattcatcgcatggttgaattgttggaacttcatttcttcccaaagtggcag
caggttttgtaccattggttgtgttcaggcccaaactttgaagaggttacacaatggtat
ttgggttggaagggactcttgccccaagaacttcttgcgaatgaacagatccgctatcag
cttaatattggtcttgacatgatgaaccaggctgttgaaggtatggaggtggtccaacct
ggtttgcgagagaacattagctatcttcgggtgcttgaacaacggcagtttgaggctcag
cagaaagcagctgcagatgctcgactgcaagctgccgcgagtctgggtggcaccacccag
atggatggcattggaggtgtgcttgagatgagtttgaaagaagttatcgaggcacatgca
caacagcatgaattgctgtttaagcctaaacctggcagaatgtataatggtcaccagata
tatggctttggtaacataagcataatagtggactctctaaatcaaaaggtatttgcccaa
catgaagagagatggtccttggtaaccctggagcagctgctggagatgcacaagaattct
attttgaagtga
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