Vitis riparia (riverbank grape): 117934378
Help
Entry
117934378 CDS
T07274
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117934378
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117934378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117934378
NCBI-ProteinID:
XP_034711920
LinkDB
All DBs
Position
17:complement(19371691..19374246)
Genome browser
AA seq
455 aa
AA seq
DB search
MLGCSNSDNNNNSSAEPFASLENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICE
ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI
KKHFRRKHSNHKQWVCEKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
ACNMGHLRPESQLLQPAACLSRTASSPSPSSETNFSVPPWSGLMTPRPVDSIFLTSDGDN
NNNNPPKKAHYHNLELQLLTTPNPLVALASPKADENHSTQLQLSIGSSDFNEKNESNITN
LINKEYSAPARCPRECNTSEKAAFGAARLKEEAREQLRLAMAEKVYAEEARQQAKRQIEL
ADKEFTHAKRIRQQAQAELDKAQALKEHARKQINSTILQITCHACKQQFRTRTAGNVAPP
DENSLVLSYMSSAITEGEVVENNHHRSVRAKTTNP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttaggctgcagcaacagcgataataacaacaactcttctgctgagccttttgctagc
ttggaaaatggaagtaatagtaagaggaagcggcggccggcggggactccagatccagac
gcggaggtggtgtctctttcgcccaaaactctattggaatcggatcgatacatttgtgag
atctgcaaccaggggtttcagagagaccagaaccttcagatgcaccggcgacgccataag
gtgccatggaagctgctgaagagggagacgccggtggtgaggaagcgggtgtttgtgtgc
ccggagcccagctgcttgcaccatgacccctgccacgcactgggtgatctggttggaatc
aagaagcacttcagaagaaagcacagtaatcacaagcagtgggtctgtgagaaatgcaac
aagggctatgctgttcaatccgattacaaagcccacctcaaaacctgcggcaccagaggc
cattcttgcgactgcggccgtgttttctccagagtcgagagcttcattgaacatcaagat
gcttgcaatatgggtcacctacggccggaatcgcagttgctgcagccggcggcgtgcttg
tctcgaactgcctctagccccagcccatctagtgagaccaatttcagtgtacctccttgg
tctggtttgatgaccccgaggccagtggattccatcttcttgacctctgatggagataat
aataacaataatcctcccaagaaagcacattaccataatctggagcttcagctgttaacc
acaccgaatcccctcgtcgccttggcttcccctaaagcggatgaaaaccattcaacccag
ttgcagctgtcgatcgggtcgagcgatttcaatgagaaaaatgaatcaaacattaccaat
ctgatcaacaaggaatattcggcacccgcaaggtgtcctagggagtgcaataccagtgag
aaagctgcgtttggagcggcgaggcttaaggaagaggcgcgcgagcagttaaggctggcc
atggcggagaaggtctatgcagaagaggcaaggcagcaggcaaagcgacagattgagcta
gccgataaagaatttacccatgcgaagagaatcaggcagcaggcgcaagcggaattggac
aaggcacaagcactaaaagaacatgccagaaagcaaatcaactcaactatcctccaaatc
acttgtcatgcctgcaagcaacaattccgaacgaggactgcaggaaacgtcgcaccaccg
gatgagaactccctggtacttagttacatgtcatctgccataaccgagggcgaagtagta
gagaacaatcatcatcgatccgttcgagctaaaactactaacccatag
DBGET
integrated database retrieval system
