KEGG   Vitis riparia (riverbank grape): 117934380
Entry
117934380         CDS       T07274                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:vri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    117934380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117934380
   03029 Mitochondrial biogenesis [BR:vri03029]
    117934380
Membrane trafficking [BR:vri04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117934380
 Others
  Specific organelles associated proteins
   Auto phagosome
    117934380
Mitochondrial biogenesis [BR:vri03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117934380
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EML ATG16 Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st WDR54 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 Cytochrom_D1 Beta-prop_EIPR1 Beta-prop_RIG_1st KNTC1_N Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 117934380
NCBI-ProteinID: XP_034711922
LinkDB
Position
17:complement(8008067..8013277)
AA seq 509 aa
MSQDEVAVDAIKHALKALRKRHLLEEGAHAPAIVALSKPFIYQGSEWKDKAENLEVELQQ
CYRAQARLSEQLVVEVAECRASKALVQEKEAIINVIQNELTKTRDECLQLKVIVEEKTKA
LELVMSENQELKAQLQEMTVKAKNIEAENKTLIDRWMLQKMQEAEHLNEANALYQDIKDQ
LKASGIAQLARQQVDGVVRQSEEGAQYYGESTVPNTCKHRIHAHEGGCAAILFEYNSGNL
ISGGHDRAVKMWDTNTGSLTRTLYGCVGSVLDLAITHDNRSIIAASSSNNLCVWDVNSGR
IRHTLTGHMDKVCSVDVSKISSRHVASAAYDRTIKVWDLQKGYCINTIIFHSNCNALCFS
TDGQTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAITSISLSRNGSVVLTSGRDNLHNLF
DMRSLEVCGTLRANGNRVASNWSRSCISADDNYVAAGSTDGSVHIWSILTAEIVSTLKEH
TASVLSCSWSGLGKPLASSDKSGIVYTWT
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcacaggatgaggtagcggttgatgctattaaacacgctctaaaggctctgcggaag
cggcatttgctagaggaaggcgctcatgctccggctatcgtagctctttccaaacctttt
atttatcagggatctgaatggaaagataaagcagaaaatcttgaagtggaactacagcaa
tgttacagagctcaagctagattatcagaacagcttgtggtggaagtggctgaatgcaga
gcttcaaaagccttggttcaagagaaagaagcaataatcaatgttatacaaaatgagctt
actaaaacaagggatgaatgcttgcaactaaaagttattgtagaagaaaagactaaagct
ttagaattagttatgagtgagaatcaggagcttaaagcacagctacaagagatgactgtg
aaagctaagaatatagaggctgaaaataagacgttgatcgatcgctggatgttgcaaaag
atgcaggaggctgaacacctgaatgaggctaatgctctttatcaagatattaaagatcag
ctcaaggccagtggtatagcacaacttgctcggcagcaagtggatggtgtggtacgccaa
agtgaagaaggtgcccagtactatggggaatcaactgttccgaatacatgtaagcacagg
atccatgcccatgagggtggctgtgcagctatattgtttgagtacaactctggcaatttg
attagtgggggacatgaccgggcagtcaaaatgtgggatacaaacactggatcattaact
cgcactctttatggttgtgtgggctctgttcttgatcttgctattacacatgataacaga
tccataattgctgcaagcagctcaaataacttgtgtgtatgggatgtgaactcaggtcgg
atccgtcacactcttacaggccacatggataaagtttgttctgtagatgtgagcaaaatt
tcaagtcgtcatgttgcaagtgcagcttatgaccgtactataaaagtttgggatttgcag
aaaggttattgtatcaacactatcattttccacagcaactgcaatgcactttgcttcagc
acagatggacaaaccatttgttcaggtcatgttgatggaaatcttcgattgtgggatatt
cagacaggaaaactacttagtgaagttgctgctcattcacttgctattacatctatctct
ttgtctcgaaatgggagtgtggtattaacaagtgggagagacaacttgcataatttattt
gatatgcggtctctggaagtttgtggcacattaagagcgaatggaaacagggtggcatct
aattggagccgatcctgtataagtgcagatgacaactatgttgctgctggatccactgat
ggatctgtgcatatttggtcaatactaacagcagaaatagtgagtactctaaaggaacac
actgcttcagttctaagttgttcatggagtggacttggaaaacctctagcctcctctgat
aagagtggaattgtttatacatggacatga

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