Vitis riparia (riverbank grape): 117934468
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Entry
117934468 CDS
T07274
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117934468
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
117934468
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
117934468
Prokaryotic type
117934468
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
117934468
NCBI-ProteinID:
XP_034712055
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All DBs
Position
17:complement(13285190..13294274)
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AA seq
329 aa
AA seq
DB search
MILTFFRLYLQHKKPLSPIYTNALNHLTLCFNPSLSSRRMKNSEANSNVKKKEKGIHIEG
YPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMYVATRG
LYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKVRAFRT
YHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDTMSDFI
VDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIHFSA
RYTTNEIQEAVSALPPPLGGRVFALTEGF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatactgacattttttaggctttacttgcagcataaaaagcccctatctccaatctac
acgaacgcattgaatcatttaacgctgtgtttcaatccatctctgagttcaaggagaatg
aaaaattcagaggcaaattcaaatgtgaagaagaaggagaagggaatacacatcgaagga
tacccagttgagggtttgtcgataggagggcaagaaacttgcataatcctcccgtccctc
aagttagcctttgacattggtagatgtccccagcgtgcaatttcacaggacttcctgttc
atttcccatggacacatggatcacattggaggactgcccatgtatgttgcgactcgtggg
ttgtatagaatgaagcccccaataattattgtaccaaaagctataaaagaaaatgtggag
atgctttttcaggtgcacagagcaatggatgagtcagagctgaagcataatctaattggc
ttgaatgtgggagaagagttttacttaagaaaagacttgaaagtaagagcatttagaacc
taccatgttataccaagtcagggttatgtagtttattctgtaaagcagaaacttaagcag
gagtatgttggccttcctgggaatgagattaagaacttgaagttatcaggtgtggagatt
acgtatacaatgacaacacctgaaattgcctttacgggagataccatgtcagacttcatt
gtggatcacactaatgttgatgctttgatggcaagagttctcatcatggagagcaccttt
gttgacaacacagtgacggtggagcatgcaagagaatatggccacactcatttgtctgag
atagtcagttatgcagataggtttcagaataaagcaattcttctgatccacttctctgct
cgttatacaacaaatgaaattcaagaagctgtctctgcattgcctccgcctttgggaggt
cgagtatttgcacttacagaaggattttga
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