KEGG   Vitis riparia (riverbank grape): 38346156
Entry
38346156          CDS       T07274                                 
Symbol
psbC, EFF16_pgp069
Name
(RefSeq) photosystem II 44 kDa protein
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri00195  Photosynthesis
vri01100  Metabolic pathways
Module
vri_M00161  Photosystem II
vri_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:vri00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    38346156 (psbC)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:vri00194]
    38346156 (psbC)
Photosynthesis proteins [BR:vri00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    38346156 (psbC)
SSDB
Motif
Pfam: PSII
Other DBs
NCBI-GeneID: 38346156
NCBI-ProteinID: YP_009527524
LinkDB
Position
Pltd:37116..38537
AA seq 473 aa
MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL
YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFTACCFVWFNNTAYPSE
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaaaaccttatattccctgaggaggttctaccccgtggaaacgctctttaatggaact
ttagctttagctggtcgtgaccaagaaaccaccggtttcgcttggtgggccgggaatgcc
cgacttatcaatttatccggtaaactacttggggctcatgtagcccatgccggattaatc
gtattctgggccggagcaatgaacctatttgaagtcgctcatttcgtaccagagaagccc
atgtatgaacaaggattaattttacttccccacctagctactctaggttggggggtaggt
cctggtggggaagttatagacacctttccatactttgtatctggagtacttcacttaatt
tcctccgcagtattgggctttggcggtatttatcatgcacttctgggacctgagactctt
gaagaatcttttccatttttcggttatgtatggaaagatagaaataaaatgaccacaatt
ttgggtattcacttaatcttgttaggtataggtgcttttcttctagtattcaaggctctt
tattttggcggcgtatatgatacctgggctcccggagggggagatgtaagaaaaattacc
aacttgacccttagcccaagtgttatatttggttatttactaaaatcgccctttggagga
gaaggatggattgttagtgtggacgatttggaagatataattggaggacatgtatggtta
ggttccatttgtatatttggtggaatctggcatatcttaaccaaaccctttgcgtgggct
cgccgtgcacttgtatggtctggagaggcttacttgtcttatagtttaggtgctttagct
gtctttggtttcactgcttgttgctttgtctggttcaataatactgcttatcctagtgag
ttttacgggccaactggacccgaagcgtctcaagctcaagcatttacttttctagttaga
gaccagcgtcttggggctaacgtgggatccgctcaaggacctactggtttaggtaaatat
ctaatgcgttccccgactggagaagtcatttttggaggagaaactatgcgtttttgggat
ctgcgtgctccctggttagaacctctaaggggtcccaatggtttggacttgagtaggctg
aaaaaagacatacaaccttggcaagaacggcgttccgcggaatatatgactcacgctcct
ttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgtc
tctcctagaagttggttagctacttctcattttgttctaggattcttcctattcgtaggt
catttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattgat
cgtgattttgaacctgttctttctatgacccctcttaactga

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