Vitis riparia (riverbank grape): 38346177
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Entry
38346177 CDS
T07274
Symbol
rbcL, EFF16_pgp057
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00630
Glyoxylate and dicarboxylate metabolism
vri00710
Carbon fixation by Calvin cycle
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01200
Carbon metabolism
Module
vri_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vri_M00532
Photorespiration
vri_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
38346177 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
38346177 (rbcL)
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
38346177 (rbcL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Top1B_N_bact
Motif
Other DBs
NCBI-GeneID:
38346177
NCBI-ProteinID:
YP_009527536
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Position
Pltd:59445..60872
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AA seq
475 aa
AA seq
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MSPQTETKASVGFKAGVKDYKLTYYTPEYETKPTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL
NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAQYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNEIIRAASKWSPELAAACEVWKEIKFEFPAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagccggtgttaaagattac
aaattgacttattatactcctgaatatgagaccaaacctactgatatcttggcagcattc
cgagtaactcctcaacctggagttccacccgaagaagcaggggccgcggtagctgctgaa
tcttctactggtacatggacaactgtgtggactgatggacttaccagccttgatcgttac
aaaggacgatgctaccacatcgagcccgttgctggagaagaaagtcaatttattgcttat
gtagcttaccctttagacctttttgaagaaggctctgttactaacatgtttacttccatt
gtgggtaatgtgtttgggttcaaagctctgcgcgctctacgtctagaggatctgcgaatc
ccccctgcttatactaaaactttccaaggcccgcctcatggcatccaagttgagagagat
aaattgaacaagtatggtcgtcccctattgggatgtactattaaacctaaattggggtta
tccgctaagaactatggtagagcagtttatgaatgtctccgcggtggacttgattttact
aaagatgatgagaacgtgaactcccaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagccatttttaaatcacaggctgaaacaggtgaaatcaaagggcattacttg
aatgctactgcaggtacatgcgaagaaatgatgaaaagggctgtatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaatactagcttg
gctcagtattgccgagataatggcctacttcttcacatccatcgtgcaatgcatgcagtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagccttacgtatg
tctggaggagatcatattcacgccggtaccgtagtaggtaaacttgaaggagaaagagag
atcactttgggctttgttgatttattacgtgatgattttgttgaaaaagaccgaagtcgc
ggtatttatttcactcaagattgggtctctctaccaggtgttctgccagtggcttctggg
ggtattcacgtttggcatatgcctgctctgaccgagatctttggagatgattccgtacta
cagttcggtggaggaactttaggacacccttggggaaatgcaccgggtgccgtagctaat
cgagtagctcttgaagcatgtgtacaagctcgtaatgagggacgtgatcttgctcgtgag
ggtaatgaaattatccgtgcagctagcaaatggagtcctgaactagctgctgcttgtgaa
gtatggaaggaaatcaaatttgaattcccagcaatggatactttgtaa
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