Veillonella rodentium: 44547418_00244
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Entry
44547418_00244 CDS
T05216
Symbol
ntcA_1
Name
(GenBank) Global nitrogen regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vrm
Veillonella rodentium
Pathway
vrm02020
Two-component system
vrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
44547418_00244 (ntcA_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
44547418_00244 (ntcA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vrm03000
]
44547418_00244 (ntcA_1)
Transcription factors [BR:
vrm03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
44547418_00244 (ntcA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
Fe_dep_repress
HTH_IclR
HTH_24
Rrf2
Motif
Other DBs
NCBI-ProteinID:
SNV56772
UniProt:
A0A239YDK1
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All DBs
Position
1:305109..305795
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AA seq
228 aa
AA seq
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MDRNLIDKLLALPGDEVHLKKGDFLFHEGDRAEYFYIVLKGRFSIKKFEASGHIFALRLV
GPGNVIGEIPLYEENTKTYVFNAIAREPSSVYCIRYDVLESAIAKDHSLAIAMMKIYTLH
MRRQQAKYRDLLLYGKKGAFYSTLLRLANSYGIKREDGIFIDIALTNQELAEFAATSRES
LNRMLSELRRLGYVAYDKHHLVICDFDALIGLLDLDVDTIDPNISNIE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtaatctaattgataaattgcttgctttgccgggggatgaagtgcatctaaaa
aaaggtgattttctcttccatgagggggatagggctgaatacttttatattgttttaaaa
ggtagattcagtataaaaaaatttgaggccagcgggcatatatttgctctgcgtcttgta
ggccctggtaatgtaataggcgagattcctctctatgaggagaatacaaaaacatacgtg
tttaatgcgattgcacgagaacccagttctgtgtattgtatacgttatgatgtgttggag
tcggctattgcaaaggatcattcgttagcgattgcgatgatgaagatctatacattacat
atgcgccgccagcaggcgaagtaccgtgatttgcttttatacggcaagaagggtgctttt
tattctaccctgttacgtttagccaatagttatggcattaagcgtgaggacggtatcttt
atagatattgccttgactaatcaagagctggccgaatttgccgccacatcaagagaaagt
ttaaatcgcatgctcagtgagttacgaagactaggctatgtagcctacgacaaacaccat
ctggttatctgtgactttgatgcattaatcggattgcttgatttggatgtcgatactatc
gatccgaacatcagtaacatcgaataa
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