Veillonella rodentium: 44547418_00295
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Entry
44547418_00295 CDS
T05216
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase dacB precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00550
Peptidoglycan biosynthesis
vrm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
44547418_00295 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vrm01002
]
44547418_00295 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
44547418_00295 (dacB)
Enzymes [BR:
vrm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
44547418_00295 (dacB)
Peptidases and inhibitors [BR:
vrm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
44547418_00295 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
44547418_00295 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
SNV57630
UniProt:
A0A239YFZ5
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All DBs
Position
1:363743..364591
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AA seq
282 aa
AA seq
DB search
MFTIIKRMVFAAICIGAFLAFTAGADNTAAAAAISPPSTIGEAVVLIDADTKEVLFAKNP
NKWMHPASTTKMVTLLTALELKGTHLDELATISNYATSMEESNLGVRVGDQITLEAVLEG
MMVASGNDAAVVVAENVSGSVEKFAADMNRIASKAGAKNSRFLNPHGLTQVGHHSTALDL
ARIAAYGMKYQMFRDKVANDYYKVPYQNRNPETIRTTNIFIRNKYPGANGLKTGYTQAAG
ECLIASATRNGHTMIVVMLNDDNRWNEAVQFLDYGFKLRGVI
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgattataaaacgaatggtttttgcagctatctgcataggggcttttttagct
ttcactgcaggtgcggacaatacagctgcggcggcagcaatttcaccgccgtcgaccatc
ggtgaggcggtagtacttattgatgcggatacgaaagaggttttattcgcaaagaatccc
aataaatggatgcatcctgcgagtaccacgaaaatggtaacgctcctgaccgctcttgaa
ttgaaggggactcatctcgatgaactggcgacaatcagcaattatgcgacgagtatggag
gaatccaatctcggtgtacgggtaggtgatcagattacgttggaggctgttcttgaaggt
atgatggttgccagcggcaatgatgcggccgttgtagtcgcggaaaatgtgagcggttct
gtggaaaagtttgccgctgatatgaaccgcatcgcctcaaaggcgggcgcgaagaacagt
cgtttcctgaatccgcatggattaacacaggtggggcatcactccacggctcttgatttg
gcacgtatcgccgcatacggaatgaagtatcagatgttccgcgataaggtagcaaatgat
tactataaggtgccatatcaaaatcgcaatcctgagacgattcgtacgacaaatattttc
attcgtaacaaatatcccggtgcaaacgggctcaagacgggatatacgcaggcggccggt
gaatgtctaatcgcttcggcgacgcgtaacggacataccatgattgtggttatgctcaac
gatgataaccggtggaacgaagcggtgcagtttttggactacggctttaaacttcgcggc
gttatataa
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