Veillonella rodentium: 44547418_00422
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Entry
44547418_00422 CDS
T05216
Symbol
polC_1
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03030
DNA replication
vrm03430
Mismatch repair
vrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
44547418_00422 (polC_1)
03430 Mismatch repair
44547418_00422 (polC_1)
03440 Homologous recombination
44547418_00422 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vrm03032
]
44547418_00422 (polC_1)
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_00422 (polC_1)
Enzymes [BR:
vrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
44547418_00422 (polC_1)
DNA replication proteins [BR:
vrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
44547418_00422 (polC_1)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
44547418_00422 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SNV58928
UniProt:
A0A239YL35
LinkDB
All DBs
Position
1:489418..490047
Genome browser
AA seq
209 aa
AA seq
DB search
MLDFVALDFETANKFKNSACSLAVITVKGGQITKKAYSLIKPPFMSFDEECIEIHGIEPK
DVLHEKTFDQLWDAIYENHLKGNIMVAHNAKFDMNVLRATLDYYKIPWPNLDYACTVKLS
RAVWPDLVNHKLNTMAAYLGVEFKHHYALDDAETCAKVVMEAAKLRGADSLPDLLKSAGV
PLEPFIDEKNRSAQEALHKEPEPEQMSFF
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgttagattttgttgcattagactttgaaacagccaataaatttaaaaatagcgcctgc
tcgctcgccgttatcaccgttaagggcggtcagattacaaaaaaggcgtatagcctcatc
aagcctccgtttatgagctttgatgaggaatgtattgaaatccacggtatcgaaccgaag
gacgtattgcatgaaaaaactttcgaccagttgtgggatgccatctatgaaaaccacttg
aaaggaaacatcatggtggcgcacaatgccaagttcgatatgaatgtacttcgcgctaca
ttggattattataagattccctggccgaatcttgattatgcatgtacggtgaaattatca
cgcgccgtatggcctgatctggtaaaccataagttgaatacgatggccgcctatttgggg
gtagagtttaaacatcactacgctctcgatgatgcggaaacctgtgcaaaggtcgtgatg
gaggccgctaaactgcgcggagctgacagtttgcctgatttgcttaaaagtgcgggggtt
ccgttggagccgtttatcgatgagaaaaatcggtcggctcaggaggctctacataaagag
ccggaaccggagcaaatgtcgtttttttaa
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