Veillonella rodentium: 44547418_00613
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Entry
44547418_00613 CDS
T05216
Name
(GenBank) H-34
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
44547418_00613
Enzymes [BR:
vrm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
44547418_00613
Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
44547418_00613
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Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
SNV60772
UniProt:
A0A239YPU9
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All DBs
Position
1:684987..686558
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AA seq
523 aa
AA seq
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MKTKRLQLMIMATLFLGVNVGGAVTAEAATVQNKSAAVAKKTASSKVVIPKSGMQKKSIF
RPLVTKPAPKPAVTQKSTSKASSTAVKKATAVKSSTKSVNTNTKSSAAKVQKSSDTNSIA
ANTDTITRNKVGTVVTSSAEHKEQVPNVRVLLGSRTQDATVKPTSDLVVLNSANGQVSQV
GANRGTIIGLRGGKIAVNGKPVDSVVTLKPSNSEAPFLFEGKRYRGGLTLRANNGTMMII
NLVPLEEYLYGVVAQEAVPSWPAAALEAQAVAARTYALHTMEQNKGKLYDVSPTTDHQVY
AGVAGESAATTDAVRKTKGVVMLYNQRPINALFHSDGGGYTEDSANVWGNDIPYLKGVKD
YSTGTSTSNWTVTTSRQALESKLNAASKGVGKLKSIQLTPLGKPGKETSDRGVSGRIKSA
TFIGTSGKTTVDGDSLRNILGLKSTLFDFYVNHNPEKGSEKAYHNFTGKNDTVYIKGHGW
GHGLGMSQWGAAEMAKQAKPGDANYYQTILRHYYSGITLKKMY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaacgattacaattgatgattatggccacattgtttttaggtgtcaatgtg
ggcggtgctgttacagcggaagccgcgacagtacaaaataagagcgctgctgtagcgaaa
aaaacggcatcatctaaggttgttatacctaaatccggtatgcagaagaaatctatattt
agaccattagtgactaaaccggcaccaaaaccggcggttacacaaaagtcaacaagtaaa
gcgagttctactgccgtaaagaaggctactgctgtaaaatcctcgactaaatccgtgaat
acaaatacaaagtcgtctgcggcaaaggtacagaagtcatcggatacaaacagtattgcg
gcaaatacggacaccattacgagaaataaagtcggtactgtggtgacgtcttctgcagag
cataaggagcaggtaccgaatgtacgtgttttattgggcagtcgtacgcaggatgcaacg
gtaaaacctacatctgatttagttgttctaaatagtgcgaacggtcaggtcagtcaggtg
ggagctaatcgtggaaccatcataggcttacgaggtggtaaaatcgctgttaacggaaag
cctgttgacagtgtggttacattaaaaccttctaacagcgaggccccgtttctttttgaa
ggaaagcgctatcgcgggggattgaccttacgcgctaataacggcacgatgatgattatc
aatctggtgcctttagaagaatatttatatggtgtggttgcgcaagaggctgtaccgtct
tggccggcagcggcattggaagcgcaggccgtagccgctcgtacatatgcattgcatacg
atggagcaaaataagggtaaattatatgatgtgagccctactacggatcaccaggtatat
gccggtgttgccggtgaatcggccgccactactgatgcagtcagaaaaactaaaggcgtt
gttatgctttataatcagcgccctatcaatgcgttattccactccgacggcggtggttat
acagaggatagtgccaatgtgtggggtaatgatattccgtatttgaaaggtgtaaaggat
tacagtaccggaacatctacatcaaactggacggttactacgtcgcgtcaggctttggaa
agcaagctgaatgcggcaagcaagggggtcggaaaattgaaaagtattcaattgactccg
ttaggtaaaccgggtaaagaaacatctgatcgcggtgtatcggggcgtattaagagcgct
actttcataggcacatccggtaaaaccaccgttgatggtgattcgttgcgtaatatttta
ggcttgaaatcgaccttgtttgatttttatgttaaccataatccggagaaggggagcgag
aaagcatatcataattttacaggtaaaaacgataccgtttatattaaaggtcacggttgg
gggcatggtctcggtatgtctcaatggggtgctgcggagatggcgaaacaggcgaaaccg
ggggatgccaattattatcaaacaattttacgtcactattatagcggcattacattaaag
aaaatgtactga
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