Veillonella rodentium: 44547418_00724
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Entry
44547418_00724 CDS
T05216
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
44547418_00724 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vrm03019
]
44547418_00724 (rnc)
03009 Ribosome biogenesis [BR:
vrm03009
]
44547418_00724 (rnc)
03036 Chromosome and associated proteins [BR:
vrm03036
]
44547418_00724 (rnc)
Enzymes [BR:
vrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
44547418_00724 (rnc)
Messenger RNA biogenesis [BR:
vrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
44547418_00724 (rnc)
Ribosome biogenesis [BR:
vrm03009
]
Eukaryotic type
90S particles
RNase
44547418_00724 (rnc)
Prokaryotic type
rRNA processing factors
44547418_00724 (rnc)
Chromosome and associated proteins [BR:
vrm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
44547418_00724 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DND1_DSRM
CSN7a_helixI
Motif
Other DBs
NCBI-ProteinID:
SNV62138
UniProt:
A0A239YV84
LinkDB
All DBs
Position
1:805803..806540
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AA seq
245 aa
AA seq
DB search
MGAVEAHKSKMTQAREESLQGLVSRLDIPVSDISIIDCAFTHTSYANEHKSKHIHHNQRL
EFLGDAVLDLIIGEYLFRTYPDMAEGSLTKIKAATVCEDSLASVSRTLDLGKYLLLGHGE
YASGGNDRNSILADTFESLIGAIYISTDYQTAMAFVLKHLTAYIDQALEGKRGKDYKTLL
QEYVQRDGDKHIVYRLLSESGPDHAKTFHMEVQIDGVTYEAGSGKSKKIAEQHAAQLTLE
RLMNK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagttgaagcgcataagagtaagatgacacaagctcgtgaagaatctcttcag
gggcttgttagtcgtttagacatacctgtttcagatatatccattatagattgtgcattt
acacatacctcttatgcgaacgaacataaatcaaagcatattcatcacaatcagcgcttg
gagtttctcggtgatgccgtattggatcttatcatcggtgaatatttgttcagaacctat
ccggatatggcggaaggtagcttgaccaaaatcaaggcggctacggtttgtgaagactct
ttggcttccgtgagtcgcacattggatttaggtaaatatttattgcttggacatggggaa
tatgcttccggcggtaatgatcgaaactctatcttagctgatacatttgagtctcttatc
ggagccatttatatttctacagattaccaaacggctatggcttttgtgttgaagcatttg
accgcttatatagatcaagccttggaaggtaagcggggcaaagattataaaacattattg
caagagtatgtacagcgagatggggataaacatatcgtatatcgtctactcagtgaaagt
gggcccgatcatgccaaaacctttcatatggaggttcagatcgatggtgttacctatgag
gccggctcaggtaaaagtaaaaaaattgcagaacagcatgccgctcaattgaccctggaa
cggttgatgaataaataa
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