Veillonella rodentium: 44547418_00729
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Entry
44547418_00729 CDS
T05216
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vrm
Veillonella rodentium
Pathway
vrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
44547418_00729 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_00729 (uvrB)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
44547418_00729 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
44547418_00729 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_19
AAA_5
AAA_22
UB2H
AAA_7
Motif
Other DBs
NCBI-ProteinID:
SNV62185
UniProt:
A0A239YT91
LinkDB
All DBs
Position
1:812613..814784
Genome browser
AA seq
723 aa
AA seq
DB search
MKHNTYNHEGGQPFKVEAPFIPTGDQPGAIASLTEGIERGEWAQVLLGATGTGKTFTMAK
VIEAVQKPTLIIAHNKTLAAQLASEFKSFFPNNAVEYFVSYYDFYQPEAYIPSSDTYIEK
DASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSDLVLSLRLGQTKSRDE
ILSKLVDIQYTRNDMNFVRGTFRVQGDTIDIFPAAYSERAVRVELFGDEIDRLVEVDALT
GEVIAERKHVAVYPASHYVTTKEKMNIAVERIEAELDEQLAKLKAADRLLEAQRLEQRTR
YDIEMMQEMGYCSGIENYSRHMSNRKAGEAPYTLIDYFPDDFLIMVDESHVTIPQVRAMY
NGDRARKESLIEYGFRLPSALDNRPLKFDEFVERINQIVYVSATPGPYEMDVQTNVAEQI
IRPTGLLDPSIEIRPIKGQMDDLLGEINTRAAKNERVLVTTLTKKMAEDLTEFLKEMGVR
VRYLHSDIVTIERAEIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSD
TAMIQTIGRAARNVNGHVIMYADRITGSMQRAIDETDRRRAVQEAYNEEHHITPKSVAKE
VKELIELTKIEDDMVTDGQGLSQAKRKGKTKSDVMDHGHEPYVQDTQSTKVADITPEELY
NKIEDVDRKMKAAAKQLEFEKAAALRDQLGVLRQQWSDMHSADNSKLKKSKRTVKKQAPK
SKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaatacatataaccatgaagggggccagccgtttaaggtagaggcgcccttt
atacctacgggggatcagccgggtgctattgcatctcttacggaaggaattgaacgtggt
gaatgggcgcaggtgttattaggcgcaacgggtaccggtaaaacatttaccatggccaag
gtcattgaagcggtgcagaaaccgacgcttatcatcgcgcataataagacgttggcggct
caattagccagtgaattcaaaagcttttttcctaataatgcggttgaatatttcgtatct
tattatgatttttatcagccggaagcatatattccgtccagcgatacctatattgaaaag
gatgcttccatcaatgatgaaatcgataaattacgacatagtgctacgatgagcttattt
gagcgtcgcgatgtcattattgtcgcttctgtaagctgtatttacggcttgggggaccct
gaggattattcggatctcgtgttatcgttgcgcttaggtcagacgaagagtcgcgatgaa
atcttatcaaaattggttgatattcaatatacgcgcaatgatatgaatttcgtacgtggt
acattccgcgtacagggggatacgattgatattttccctgccgcctatagtgaaagagcc
gtgcgggttgaactgttcggcgatgaaatcgaccgcctcgtggaagtggatgcattgacc
ggcgaagtcattgcggaacgcaagcatgttgctgtctatccggcttctcattatgtaacg
acgaaagaaaaaatgaatattgccgtagagcgtattgaagccgaactggacgaacagttg
gcgaaattaaaagcggctgatcgacttttggaagcgcagcgattggaacagaggacgcga
tacgacattgaaatgatgcaggagatgggatattgttcgggtatcgaaaattattcccgt
catatgtcgaatcgcaaggccggggaagcaccgtatacattgattgattatttccctgat
gattttcttattatggtggatgagtcacatgtaacaataccgcaggtgcgggccatgtat
aatggagaccgggcccgtaaggaatcccttatcgaatatggattccgtttgccgtccgca
ttggataacagacctcttaaattcgatgagtttgtagagagaatcaatcaaattgtttac
gtatcggctacaccgggtccatatgagatggatgtgcaaacaaatgtggcggagcaaatc
attcgacctacaggccttttagatccgtctattgaaatccgtcctatcaaggggcaaatg
gatgacttgcttggggaaatcaatacaagagccgcaaagaatgaacgcgttctcgttacg
acattgacgaagaagatggcggaagatttgacagaattcttgaaggaaatgggcgttcgc
gtgcgctatcttcattcggatatcgttaccattgagcgggctgagattattcgggacttg
cgtgccggcgtattcgatgtgctggtaggaattaacttgctaagagaaggcctcgatatg
cctgaggtatccttagtggctattctcgatgcggataaggaaggctttctgcgttccgat
acggccatgattcagacgatcggtcgtgcagctcgtaatgtaaatggtcatgttatcatg
tatgctgaccgtattacgggctccatgcagcgcgctatcgatgaaacggaccgtcgtcgt
gccgtacaggaggcttataacgaagaacatcatattacaccgaaatcggtagctaaagag
gttaaggaattaattgaattaaccaagattgaagatgatatggtgacggatggacagggc
ctttcacaggcaaaacgcaaaggcaagaccaaatccgatgtgatggatcacggtcatgag
ccatatgtacaagatacacaatccaccaaggtggcggatattacaccggaagaattgtat
aataagattgaggatgtagaccgaaaaatgaaggcggccgctaagcagttggaatttgaa
aaagctgcagcattacgcgatcagttgggagttttacgtcaacaatggtcggatatgcac
agcgccgataacagtaaattgaagaaatcgaagcgaactgtgaaaaaacaagcgccgaaa
agtaaaaaataa
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